| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1877 |
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| Symbol | |
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| ID | 5610908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2262584 |
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| End bp | 2263618 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932763 |
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| Product | Glu/Leu/Phe/Val dehydrogenase, dimerisation region |
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| Protein accession | YP_001473616 |
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| Protein GI | 157375016 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000134447 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCTGTAT TCAATCATAT CTCTTTTGAC GAACATGAAC AGGTTGTCTT TTGTCAGGAC
AAAGAAAGTG GCTTAAAAGC GATTATCGCC ATCCACAATA CAAAACTAGG GCCTGCTGTC
GGTGGCTGTA GAATGTGGAA CTACGAGTCT GACGACGAAG CCTTAAATGA TGTATTAAGA
CTATCACGTG GCATGACCTA TAAAAATGCC CTTGCCGGAT TAGAGATGGG CGGCGGAAAG
TCTGTGATCA TCGCCGATCC TGAGACTGAA AACAGAGAAG CACTATTTCG TGCTTTCGGC
CGTTGTATCC ACGGCCTGGG TGGAAAATAT TATTCGGCTG AAGATGTCGG TGTATCAACC
GCGGATATTA TGATTGCCCA TGAAGAGACG CCATATATGG CAGGCCTTGA GGGTAAAAGT
GGTGATCCAT CACCTTTCAC CGCCTTGGGT ACATATTTAG GAATAAAGGC TGCCGTAAAG
CATCAGCGCG GCCTTGACTC TCTCAAAGGG CTTAAAATCT CAGTTCAGGG TGTTGGCCAT
GTTGGTTATT ACCTATGTCG TCACCTACAC GAAGAGGGAG CCGAGCTAAT CGTTACCGAT
ATCCACCAGT CTTCATTAGA CAAGGTAGCC ACAGAGTTCG GGGCTACCGT GGTGGCCCCA
CAAGATATCT ATAAGCAAGA TGTCGATGTT TACGCTCCTT GTGCATTGGG TGCAACCATT
AATGATGTCA CCATCCCACA ACTTAAAGCG ACGATCGTTG CCGGTTGTGC CAATAACCAG
TTAGCCGAGC CACGTCATGG TGAGAAGCTT AAAGAGCTCG ATATCTTGTA TGCGCCGGAC
TATGTGATCA ATGCCGGTGG CATTATCAAC GTGTCGTTCG AAAAAGATTA TGACGTGACC
TCATCGACTA AAAAAGTCGA AGAGATCTAC GGCACTCTGA TGAGAATATT TGCCCAGGCA
GACGAGCAGG ACAGAACGAC AGGTTCTGTT GCCGATGAGA TGGCACGTAA CATCATTGAA
GCCGCCAAAA GCTAA
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| Protein sequence | MAVFNHISFD EHEQVVFCQD KESGLKAIIA IHNTKLGPAV GGCRMWNYES DDEALNDVLR
LSRGMTYKNA LAGLEMGGGK SVIIADPETE NREALFRAFG RCIHGLGGKY YSAEDVGVST
ADIMIAHEET PYMAGLEGKS GDPSPFTALG TYLGIKAAVK HQRGLDSLKG LKISVQGVGH
VGYYLCRHLH EEGAELIVTD IHQSSLDKVA TEFGATVVAP QDIYKQDVDV YAPCALGATI
NDVTIPQLKA TIVAGCANNQ LAEPRHGEKL KELDILYAPD YVINAGGIIN VSFEKDYDVT
SSTKKVEEIY GTLMRIFAQA DEQDRTTGSV ADEMARNIIE AAKS
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