| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1870 |
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| Symbol | |
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| ID | 5611641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2253375 |
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| End bp | 2254187 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640932756 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473609 |
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| Protein GI | 157375009 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1806] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000142601 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000127177 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGCGTA AAGTATTTTA TATCTCAGAT GGGACCGCGA TCACAGCTGA AGTGTTTGGC
CATGCAGTCC TTTCTCAGTT TCCCGTTGAG TTTGATGCAC TTACAATTCC TTTCGTCGAA
ACAGAAGCTA AAGCTCATGA TGTAAAGCTT CAAATCAATG ATTGTTTTAT TACAACAGGT
GAACGGCCAT TAGTATTCCA TTCGATCGTC AAAGCCGAGA TCCGAGACAT CATCTATAGC
AGTGAAGGAC TCGATTACGA CTTTTTGAAC ACTTTTGTCG CGCCATTAGA GCTACAATTA
GGAATGAAAG CCTCTCCGGT CGTTCATCGT ACTCACGGTA AGGCTAATGA AGGCTATGAA
GCACGTATCG ATGCGATTAA TTACACGATG GACAACGATG ACGGGCAGAC CTTAAAGAAC
ATAGATAAAG CCGACTTAGT CCTTTTAGGC GTGTCACGTT GTGGCAAGAC CCCAAGTAGC
CTCTACCTTT CGATGCAATT TGGTATCAAA GCGGCTAACT ACCCTTTTGT CGAAGATGAT
ATGGATAACC TTAAACTCCC CACTGCCTTA AAAGAGAATA AGAGCAAACT ATTTGGTCTA
ACCATCGATC CAGTGCGATT ACATGAAATA CGTAAGAGCC GAATGGATAA CAGCCGTTAC
TCCTCTTTGA GGCAATGCCG TATCGAAGTG AAAGAGGTCG AGATGATGTA TAAACGTGAG
CGGATCCCCT TTGTTAATAC AACCAACCAT TCGGTCGAAG AGATAGCGAC AAAGATTTTG
GACGTCACCG GACTCGAACG TCACATGTTC TAA
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| Protein sequence | MLRKVFYISD GTAITAEVFG HAVLSQFPVE FDALTIPFVE TEAKAHDVKL QINDCFITTG
ERPLVFHSIV KAEIRDIIYS SEGLDYDFLN TFVAPLELQL GMKASPVVHR THGKANEGYE
ARIDAINYTM DNDDGQTLKN IDKADLVLLG VSRCGKTPSS LYLSMQFGIK AANYPFVEDD
MDNLKLPTAL KENKSKLFGL TIDPVRLHEI RKSRMDNSRY SSLRQCRIEV KEVEMMYKRE
RIPFVNTTNH SVEEIATKIL DVTGLERHMF
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