| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1861 |
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| Symbol | grxA |
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| ID | 5611668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2240334 |
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| End bp | 2240603 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932747 |
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| Product | glutaredoxin 1 |
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| Protein accession | YP_001473600 |
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| Protein GI | 157375000 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0695] Glutaredoxin and related proteins |
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| TIGRFAM ID | [TIGR02183] Glutaredoxin, GrxA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0977103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.186962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGTCG TAATTTTTGG CCGTCCAGGC TGCCCATACT GTGTTAGAGC GGTACAACTT
TCAGAGCAAC TTGTTGAAGC TCGAGAAGAC TTTAAATTCA AGTATGTCGA TATTCATGCC
GAAGGGATCA GCAAGGCCGA TCTTGAAAAA ACGGTAGGTA AGCCTGTTGA GACTGTTCCG
CAGATTTTCG TCGATAAAGA GCACGTAGGT GGCTGCACCG AATTCGAACA ATTTGTAAGA
GAAAATCAGC TTCTGACACA GCCAGCATAA
|
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| Protein sequence | MFVVIFGRPG CPYCVRAVQL SEQLVEARED FKFKYVDIHA EGISKADLEK TVGKPVETVP
QIFVDKEHVG GCTEFEQFVR ENQLLTQPA
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