| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1851 |
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| Symbol | |
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| ID | 5611869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2227378 |
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| End bp | 2228271 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932727 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001473590 |
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| Protein GI | 157374990 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000146772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTAA TAAGAGTGCT GTGTATGTGG CTTAGAGTAT TGTTGGCGTT GACACTGTGT
ATGCCTTTGT TTGCTAATGC AGAGTTGCGT CATTATGTTG CCTCTCTCGA TCAATCCCAA
TGGAAACTCA GTGATAGTAC CCCCATTATA TGTCGCCTTG AGCATGATAT TCCCTCCTAT
GGTAAAGCGG TATTCACAAG CACAGCAGGC AAAGATCATA ATCTGAATTT CAGTTTAGAT
ATGTGGGTAA AGCCAGATCA AGTGACTCAG GCTAAGTTAA TGAGCCTGGC TCCGGCGTGG
CGCCCCGGAA TTCTCTCTAA AGAGATAACT GAGCTCAGTT ATCAGAAGTA TTTTAGTGGT
GAAGTGCCCA GAAATGCTGC CTGGTCTATG TTAGCCGAGT TAGAGAGAGG GATGCAGCCC
ACCTTCTATT ATGCTGACTG GTATAACCGA TCGAATAAAA TTGCTGTTGG GCTATCGGCC
GTTAACTTCA ACCGAAAATA TGGTGAGTTT AAATCTTGCT TAGCCGGTTT ATTGCCATAC
AGTTTTGATG ATATTGCGTT TACCGTTTTG ACCTATGAAT TTGGTGGAGC AGAGTTGACG
CGCTACGCCA AGGCGCAGAT TGCTAAAATT CAAGAGTACC TTGCCTATGA TCCTGAGGTT
GAACTGGTAT TGATCGATGC TTACACCGAT AGTTACGGTG GCCGTTCAAT TAACCAAAAA
GTATCCGAGG AGAGAGCTGA TTCTGTAAAG AACTTCTTCC TGTCTGCGGG GATAACACAA
GAGAGAATTC ATACCGTTGG CCATGGTGAG CGCCACCATG TGGCATCGAA TGATACCATC
GATGAGCGCT CTCGAAACAG GCGAGTCGTT ATTAGAATTA GTAAACCTAT GTAG
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| Protein sequence | MELIRVLCMW LRVLLALTLC MPLFANAELR HYVASLDQSQ WKLSDSTPII CRLEHDIPSY
GKAVFTSTAG KDHNLNFSLD MWVKPDQVTQ AKLMSLAPAW RPGILSKEIT ELSYQKYFSG
EVPRNAAWSM LAELERGMQP TFYYADWYNR SNKIAVGLSA VNFNRKYGEF KSCLAGLLPY
SFDDIAFTVL TYEFGGAELT RYAKAQIAKI QEYLAYDPEV ELVLIDAYTD SYGGRSINQK
VSEERADSVK NFFLSAGITQ ERIHTVGHGE RHHVASNDTI DERSRNRRVV IRISKPM
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