| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1849 |
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| Symbol | |
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| ID | 5611867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2225953 |
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| End bp | 2226474 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932725 |
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| Product | YbaK/prolyl-tRNA synthetase associated region |
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| Protein accession | YP_001473588 |
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| Protein GI | 157374988 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2606] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000316279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCATTG CAATCACACT TAATGAGTAC CTCGATAAAG AACATGTACA TTTCGAACAT
GTAGAGCATC GTCGCACCCA AACATCACTG GATTCGTCTC GTTCTGCCCA TCTACCCGCA
GCTAGGGTGA GTAAAGCTGT GGTGTTACAA GATGATGATG GGGAGTACTT GATGGCTTCA
CTGCCTGCCA ATAAGCGGGT GTCACTACCC GAGGTTGACA ATCTCATGGG TAAAAATTAT
CACTTAGTCA GTGAGCGCAA GTTGCAGGAC CTGTTTCCTG ATTGTGTTAA AGGCGCGATA
CCGGCGATTG GGCGTGCTTA TCAAATGCCA ATGCTGGTAG ATGACAGCTT GTTAACCGCT
GAACCTGTCT ATATTGAGTC CGGCGATCAT GAGAATTTGC TGAAACTGAA CTCTACGGAA
TACGCAAAAC TCGTCGCTAA AGCGCCTCAT GGAAATATTC AGGGGGCTAA TATGGGCGCG
CCACGTTTGT GGGAAAGATC GAGTCGAGAT AGATGGTTAT GA
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| Protein sequence | MAIAITLNEY LDKEHVHFEH VEHRRTQTSL DSSRSAHLPA ARVSKAVVLQ DDDGEYLMAS
LPANKRVSLP EVDNLMGKNY HLVSERKLQD LFPDCVKGAI PAIGRAYQMP MLVDDSLLTA
EPVYIESGDH ENLLKLNSTE YAKLVAKAPH GNIQGANMGA PRLWERSSRD RWL
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