| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1848 |
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| Symbol | |
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| ID | 5611992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2225132 |
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| End bp | 2225737 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932724 |
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| Product | alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen |
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| Protein accession | YP_001473587 |
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| Protein GI | 157374987 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000468966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGTAT TAGTAGGCCG TCCGGCTCCT GACTTCACTG CTGCAGCTGT ACTTGGTAAT
GGCGAAATCG TAGATAGCTT TAACCTTAGC GAAGCGATTC AAGGCAAGCC AACGGTAGTT
TTTTTCTACC CACTCGATTT CACTTTCGTT TGTCCATCTG AACTGATTGC ATTCGATCAC
CGTATTGAAG AGTTCAAGAA ACGTGGTGTA GAGGTGATTG GTGTCTCTAT CGATTCTCAG
TTCACACATA ATGCATGGCG TAACACACCA GTTGCTGAAG GCGGGATCGG TCCTGTTCAG
TACACACTGG TTGCAGACGT TAAGCATGAG ATCTGTAAAG CTTATGATGT TGAGCATCCT
GAAGCGGGTG TTGCTTTCCG TGGTTCTTTC CTTATCGACA AAGAAGGTCA GGTTCGTCAC
CAGGTCGTTA ACGATCTTCC ACTAGGCCGT AACGTTGATG AGATGCTACG TATGATCGAT
GCACTTCAAT TCCATGAAGA GCACGGTGAT GTATGCCCAG CGGGTTGGGA GAAAGGTGAT
AAAGGTATGG ACGCAAGTCC GGAAGGCGTT GCTTCTTACC TGACTGACAA TGCTGACGAC
CTATAA
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| Protein sequence | MSVLVGRPAP DFTAAAVLGN GEIVDSFNLS EAIQGKPTVV FFYPLDFTFV CPSELIAFDH
RIEEFKKRGV EVIGVSIDSQ FTHNAWRNTP VAEGGIGPVQ YTLVADVKHE ICKAYDVEHP
EAGVAFRGSF LIDKEGQVRH QVVNDLPLGR NVDEMLRMID ALQFHEEHGD VCPAGWEKGD
KGMDASPEGV ASYLTDNADD L
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