| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1846 |
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| Symbol | |
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| ID | 5611990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2222749 |
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| End bp | 2223375 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932722 |
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| Product | Uracil phosphoribosyltransferase |
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| Protein accession | YP_001473585 |
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| Protein GI | 157374985 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000894444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTTG TTGAGGTTAA GCATCCTTTA GTGCGTCATA AAATTGGACT AATGCGTGCG
GGAGATATCA GCACTAAACG TTTCCGTGAG TTAGCCGCTG AGGTCGGAAG TTTATTGACC
TACGAAGCAA CAGCTGATTT TGCGACAGAA ACTGTGACAA TTGAAGGTTG GAACGGTCCT
GTTGAGATTG AGCAAATAAA GGGTAAAAAA GTTACCGTAG TACCAATTCT TCGTGCAGGT
CTTGGCATGA TGGATGGTGT TCTTGAAAAC ATTCCAAGTG CACGTATCTC TGTAGTTGGT
ATGTACCGTG ATGAAGAAAC ACTCGAGCCA GTGCCATATT TCGAGAAGCT TGCCAGTGAT
ATGCCTTCAC GTATCGCCTT GGTTGTCGAT CCTATGCTTG CGACCGGTGG TTCTATGATT
TCAACTATCG ATCTTCTAAA AGATCGTGGT TGTACCGAGA TAAAAGCACT CGTCTTGGTT
GCTGCTCCGG AAGGTGTTGA AGCACTTCAA AAAGCACACC CGGATGTAGA GCTTTATACC
GCTTCTATCG ACCGTTGTTT GAACGAGCAG GGATATATTC TTCCTGGTCT TGGTGACGCG
GGCGATAAGA TTTTCGGAAC GAAATAA
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| Protein sequence | MKVVEVKHPL VRHKIGLMRA GDISTKRFRE LAAEVGSLLT YEATADFATE TVTIEGWNGP
VEIEQIKGKK VTVVPILRAG LGMMDGVLEN IPSARISVVG MYRDEETLEP VPYFEKLASD
MPSRIALVVD PMLATGGSMI STIDLLKDRG CTEIKALVLV AAPEGVEALQ KAHPDVELYT
ASIDRCLNEQ GYILPGLGDA GDKIFGTK
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