| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1845 |
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| Symbol | |
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| ID | 5611989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2221489 |
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| End bp | 2222526 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932721 |
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| Product | phosphoribosylaminoimidazole synthetase |
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| Protein accession | YP_001473584 |
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| Protein GI | 157374984 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
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| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000474517 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACTC CTACCCAGCT GAGCTATAAA GATGCAGGTG TTGATATCGA CGCCGGTAAT
GCACTTGTTG ATAATATTAA AACTGCAGTG AAACGTACCC ACCGTCCAGA AATTATGGGC
AACCTAGGTG GATTTGGTGC TCTTTGTGAG TTACCGACTA AGTACAAACA CCCGGTTCTT
GTTTCTGGTA CCGATGGTGT CGGAACTAAA CTCAGATTAG CCATTGACCA TAAGAAGCAT
GACACCGTAG GTATTGACCT TGTTGCTATG TGCTCAAACG ATTTAATCGT GTCAGGTGCT
GAGCCACTCT TTTTCCTCGA TTACTATGCC ACCGGCAAAT TAGACGTTGA AGCGGCCACT
TCAGTCGTTA AAGGTATCGC CGAAGGCTGT GTACAATCCG GTTGTGCGCT TATTGGCGGT
GAAACGGCCG AAATGCCTGG CATGTATGAA GGCGATGACT ACGACTTAGC AGGCTTCTGC
GTCGGCGTCG TTGAAAAAGC AGACATTATC GACGGTTCTA AAGTCGTTGC CGGTGATTCA
CTCATCGCAT TAGCATCGAG CGGACCTCAC TCAAATGGCT TCTCACTCAT TCGTAAAGTG
CTTGAAGTCA GCGAAGCCGA TCCTCAACTG AACCTTGAAG GTAAACCACT GATTGACCAC
CTGCTTGAAC CCACAAAAAT CTATGTTAAG TCGCTATTAA AGCTACTCGA ACAAACAGAT
GTTCATGCAA TGGCCCATAT TACTGGCGGC GGATTCTGGG AAAATATCCC ACGTGTGCTT
CCAGAAGATT GTAAAGCCGT AGTAAAAGGC GACTCATGGC AATGGCCCAC CGTTTTCAAC
TGGTTAATGG AAAACGGTAA CATTGCTGAA TTTGAAATGT ACCGCACATT CAACTGTGGC
GTAGGTATGG TTGTCGCCCT ACCTAGCGAG AAAGTTGATG CTGCACTAAC GCTGCTCAAT
GCCGAAGGTG AAAACGCCTG GTTAATCGGT GACATTGCCA AGCGCAATGG TGATGAAGAG
CAAGTGGAGA TCCTGTAA
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| Protein sequence | MSTPTQLSYK DAGVDIDAGN ALVDNIKTAV KRTHRPEIMG NLGGFGALCE LPTKYKHPVL
VSGTDGVGTK LRLAIDHKKH DTVGIDLVAM CSNDLIVSGA EPLFFLDYYA TGKLDVEAAT
SVVKGIAEGC VQSGCALIGG ETAEMPGMYE GDDYDLAGFC VGVVEKADII DGSKVVAGDS
LIALASSGPH SNGFSLIRKV LEVSEADPQL NLEGKPLIDH LLEPTKIYVK SLLKLLEQTD
VHAMAHITGG GFWENIPRVL PEDCKAVVKG DSWQWPTVFN WLMENGNIAE FEMYRTFNCG
VGMVVALPSE KVDAALTLLN AEGENAWLIG DIAKRNGDEE QVEIL
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