| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1844 |
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| Symbol | purN |
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| ID | 5612030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2220845 |
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| End bp | 2221489 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932720 |
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| Product | phosphoribosylglycinamide formyltransferase |
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| Protein accession | YP_001473583 |
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| Protein GI | 157374983 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN |
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| TIGRFAM ID | [TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000807934 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAAAA GCTGTCGCGT ATTAGTATTA ATCTCTGGTA ATGGTAGTAA TCTACAAGCC
ATTATCGATG GGTGTGATGA TAACCTTGAA GCCGATGTCG TTGGCGTTAT CAGTAACAAA
TCTGATGCTT ACGGTCTTAT CCGCGCCCAC CAAAATGAGA TTGATACCAG TTGTGTGATA
GCTCATAAAG ACGAAACTCG TGTTGAGTAT GGTGCTCGCT TGAAACTTGC CATATCGAAA
TACCAGCCTG ATCTGATTGT TTTGGCTGGT TTTATGCGCA TCTTGAGTGA CGAGTTTGTA
CAAAGCTATG AAGGTAAGAT GATCAACATT CACCCTTCTC TTCTACCTAA GTACCCCGGA
CTCAATACTC ATCAACGTGC CATCGATGCG AGTGATAAAG AACACGGTGC CAGCGTACAC
TTTGTGACGC CCGAACTCGA TTCGGGTCCT GTTATCCTTC AGGCTAAAGT GCCGGTCTAC
GGCGAGGATA CCGCAGAGCT ATTGGCTGAG CGCGTGAACC AGCAGGAGCT TGCTATCTAC
CCTATGGTCG TTAAGTGGTT TAGCCAAGGG CGACTAAAGA TGACTGATGG CGCCGCTTAT
CTCGACGATA TTCGTCTCGG TGAAGCTGGC TATGCGGCTG ACTAG
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| Protein sequence | MSKSCRVLVL ISGNGSNLQA IIDGCDDNLE ADVVGVISNK SDAYGLIRAH QNEIDTSCVI
AHKDETRVEY GARLKLAISK YQPDLIVLAG FMRILSDEFV QSYEGKMINI HPSLLPKYPG
LNTHQRAIDA SDKEHGASVH FVTPELDSGP VILQAKVPVY GEDTAELLAE RVNQQELAIY
PMVVKWFSQG RLKMTDGAAY LDDIRLGEAG YAAD
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