| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1838 |
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| Symbol | asnB |
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| ID | 5612360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2211309 |
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| End bp | 2212970 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932714 |
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| Product | asparagine synthetase B |
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| Protein accession | YP_001473577 |
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| Protein GI | 157374977 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTTCAA TATTTGCCAT TTTAGATATT AAGTCTGATG CAACACCACT TCGTCAGGTT
GCGCTGGAGA TGTCTAAACT ACTTCGTCAT CGCGGTCCCG ATTGGTCAGG GATCTACAGC
TGTGATAAAG CTATTCTCGC TCACGAGCGT CTCGCTATTG TCGATATTGA ACACGGTGCT
CAACCTCTGA TCAGCCAAGA CGAAAGCATC ATTCTTGCTG TCAACGGTGA GATCTATAAC
CACAAAGAAC TCAAGGCCGA GTTAGGCGAT AAGTACAGCT ATCAAACCAA CTCTGACTGT
GAAGTGATCC TATCCCTCTA TCAGGAGTAT GGTGCAGAGT TTCTGGACAA ACTTAACGGT
ATATTCGCCT TTGTTTTATA TGATAAGAGC AAAGATCTTT ATCTGATCGG TCGCGACCAT
ATGGGGATCA TCCCGCTTTA CACGGGTCTC GATGCAGAGG GTAACTTCTA TATCGCTTCG
GAAATGAAAG CCTTGATGCC GGTATGTAAA ACGGTAGAAG AGTTTAAGCC CGGTCACTAT
ATGACCAGCA GCGAGGGTTA CGTTCATTAC TATCAACGTG ACTGGCGAGA GTTTGATGCG
GTAAAAGAGA ACCCGGCCAG TGTCGAAGAG CTCAGAGATG CGCTTGAAGC CTCGGTAAAG
CGTCAGTTGA TGTCTGATGT CCCTTATGGT GTCTTACTCT CCGGCGGCCT CGACTCTTCG
GTTATCTCAG CAATCACTCA GACCTTCGCT AAGCGTCGCA TCGAGGATGA TGGTGAGAGC
AGTGCATGGT GGCCGCAACT TCACTCTTTT GCCGTGGGGC TTGAAGGTGC ACCAGATTTG
ATTGCCGCCA AAAAAGTGGC CGATGCAATT GGAACGATTC ACCATGAGAT CACCTTTACC
TTCCAGGATG GTATCGATGC GATCAAAGAT GTGATTTATC ATCTGGAAAC TTATGATGTC
ACCACCATTC GCGCCGCGAC ACCTATGTAC TTGATGGCAA GGAAAATTAA AGCCATGGGC
ATAAAGATGG TGCTATCAGG TGAAGGCGCC GATGAGTTAT TTGGCGGTTA CCTCTACTTC
CATAAGGCGC CAAACGCTCA GGCATTCCAC GAAGAGTTAG TACGAAAACT TGATAAACTG
CACCTGTTCG ATTGCCTGCG TGCAAACAAG GCGATGGCTG CCTGGGGACT GGAAGCACGT
GTACCTTTCC TCGACAAAGA GTTCATGGAT GTCGCAATGC GCATTAACCC GGAAGCCAAA
ATGTCTAAAG ATGGCAAGAT TGAGAAGCAT ATTCTTCGTC AAGCCTTCGA ACACAAGTTA
CCTAAAGAGG TGGCTTGGCG CCAAAAGGAG CAGTTCAGTG ATGGCGTGGG CTACTCCTGG
ATTGATGGTT TGAAAGAGCT GGCCGAAGAG AAAGTTGACG ACCTTAAATT AGCGAACGCA
AAATTCAGGT TCCCTTATAA CACACCTGAA ACTAAGGAAG CTTATTTCTA TCGCAGCTTC
TTTGAAGAGC TCTTCCCACT GCCTACAGCC GCTGAAACGG TTCCAGGCGG CAAATCGGTA
GCCTGCTCGA CACCTGAAGC CTTAGCATGG GATGAGAGCC TGCAAGGTAT CATAGACCCA
TCGGGACGAG CGGTGCGCTC GGTTCATGAA CAGGCCTATT AA
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| Protein sequence | MCSIFAILDI KSDATPLRQV ALEMSKLLRH RGPDWSGIYS CDKAILAHER LAIVDIEHGA
QPLISQDESI ILAVNGEIYN HKELKAELGD KYSYQTNSDC EVILSLYQEY GAEFLDKLNG
IFAFVLYDKS KDLYLIGRDH MGIIPLYTGL DAEGNFYIAS EMKALMPVCK TVEEFKPGHY
MTSSEGYVHY YQRDWREFDA VKENPASVEE LRDALEASVK RQLMSDVPYG VLLSGGLDSS
VISAITQTFA KRRIEDDGES SAWWPQLHSF AVGLEGAPDL IAAKKVADAI GTIHHEITFT
FQDGIDAIKD VIYHLETYDV TTIRAATPMY LMARKIKAMG IKMVLSGEGA DELFGGYLYF
HKAPNAQAFH EELVRKLDKL HLFDCLRANK AMAAWGLEAR VPFLDKEFMD VAMRINPEAK
MSKDGKIEKH ILRQAFEHKL PKEVAWRQKE QFSDGVGYSW IDGLKELAEE KVDDLKLANA
KFRFPYNTPE TKEAYFYRSF FEELFPLPTA AETVPGGKSV ACSTPEALAW DESLQGIIDP
SGRAVRSVHE QAY
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