| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1834 |
|---|
| Symbol | |
|---|
| ID | 5612273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | + |
|---|
| Start bp | 2209195 |
|---|
| End bp | 2209590 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640932710 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001473573 |
|---|
| Protein GI | 157374973 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATAA GAATAGCGAT AGATGAAGAT CTTGAATCTT TAGCACTTAT GTTCGATGAG
TATAGAAAAA GTTTAGGAAA GGAGTCTGAT CCTCAGGGAG GGAAAGAGTT CATCGAGTCC
AGGTTACTCG AAAATGACTC GGTTATTTTT ATTGCTCTAC GTTGTGGTGA GCCGGTTGGC
TTTATTCAGT TATACCCGTC ATTTTCATCC AGCTTACTAA AACCTTTGTG GTATTTTGAT
GACCTCTATG TAGCCGAGTC GTTTCGTGGC CAAGGGATTG CCAGAGACTT GGTCGCAAAA
GCCAAAGAGC TTGCCGATGA AACTCAGGTC CTCGCCGTTC GACGGGAAAG GTTGGAAGGG
GATGGATTTG TGCCTATTGA ATCATTCTCC ATTTGA
|
|---|
| Protein sequence | MQIRIAIDED LESLALMFDE YRKSLGKESD PQGGKEFIES RLLENDSVIF IALRCGEPVG
FIQLYPSFSS SLLKPLWYFD DLYVAESFRG QGIARDLVAK AKELADETQV LAVRRERLEG
DGFVPIESFS I
|
|---|
| |