| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1832 |
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| Symbol | |
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| ID | 5612369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2207554 |
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| End bp | 2208573 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932708 |
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| Product | oxidoreductase FAD-binding subunit |
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| Protein accession | YP_001473571 |
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| Protein GI | 157374971 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAT TTTATTTTGA TGGGCAGGGG GTCGATGCTC GACCCGATGA AACTGTGTTA
GATGCCCTGC TCAGAGAGGG ACATCCGGTT AACTACTCGT GTAAGAAAGG CAGGTGCAAA
ACCTGCTTAG TGCAGCACCT TGAAGGGGAG TTAATGGCGG GAGCCCAAAG AGGGCTCACA
TCCCGCTTAA AAGAGAATCA TTATCTGTGT TCCTGTCAGT GCCGGCCAAC CCAGGGCCTT
AAATTAAAAT CTGTATTAGC TCAGGATCTG TTTATTCCGG CGAAACTGTA CTCTAAAGAG
TACCTGTCTG ATTCTGTCGT TAAGTTGAAG ATCGAGGCTG CGGAGAAAAT AGAACACAAG
GCGGGCCAGC ACATCAATTT ACGCCGATTC GATGGTCTTA CCAGAAGTTA TTCCATTACC
AATGGGGCTT ATTCTGAGTT CATAGAGCTG CATGTCAGAA GAAAGTACAA TGGCCAGTTT
AGTGATTGGC TGTTCAACCA TGCCAGCATC GGGGAAAACA TATTAATTCA GGGGCCATGG
GGAGATTGCT GTTATTCGAC AGATTTTGTC GACGATACCT TGATCTTGAT CGGTAGCGGG
ACCGGCTTGG GCTCTGTGTA TGGTATTGCC AGAGATGCAT TGGTGAGCGG CCACAGGGGA
GAGATATATC TCTATCATGG TGCCAGAAAC TTCGAAGAGC TATATCAACA CTCAACCTTG
TTGAAGATGA TGATGGAATA TCGAAACTTT ACTTATCAAG CCTGTATAGA GAGTGATAAT
GAGGGGGAAG AACACCTTTC TGGCCGTGTG CTTCAGGGCG ACCCCTTCGA CGTGGCAATG
AGTCGACACC CGTTCGACAG GAGTATACCT TGCGATAGTC AGAATCGTTT TTACCTGTGT
GGTGAGCCAA GCTTTGTCTC TAAGGGACAA GAGACGATAT TTTTAAACGG CACACCATTG
GATAGAGTAC ACGTGCTATC TTTCGACTAT AAAGATCTCA GGAGTCGAGC ACGGGATTAG
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| Protein sequence | MTKFYFDGQG VDARPDETVL DALLREGHPV NYSCKKGRCK TCLVQHLEGE LMAGAQRGLT
SRLKENHYLC SCQCRPTQGL KLKSVLAQDL FIPAKLYSKE YLSDSVVKLK IEAAEKIEHK
AGQHINLRRF DGLTRSYSIT NGAYSEFIEL HVRRKYNGQF SDWLFNHASI GENILIQGPW
GDCCYSTDFV DDTLILIGSG TGLGSVYGIA RDALVSGHRG EIYLYHGARN FEELYQHSTL
LKMMMEYRNF TYQACIESDN EGEEHLSGRV LQGDPFDVAM SRHPFDRSIP CDSQNRFYLC
GEPSFVSKGQ ETIFLNGTPL DRVHVLSFDY KDLRSRARD
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