| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1827 |
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| Symbol | |
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| ID | 5612400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2202343 |
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| End bp | 2203128 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932703 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473566 |
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| Protein GI | 157374966 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.149521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTAACGA ATCTGCTTAC CACTTTCTTA TTGACTGCAA GGGATGTGAT CCCCATTGCG
GTTATCCTGT TTGGTTTCCA ACTCGGGGTA TTAAAACGCC CTATAGCAAA TCTACGGCAG
GTTGTGCTTG GGTTTGTTTA CGTGATTGTT GGCCTGAGCC TCTTCCTGGT CGGGCTAGAG
CTGGCACTGT TCCCCATAGG TGAGAGCATG GCAGAGCAGT TGACGTCGCC TGAATTTATT
CACCCTGAAG CCGGGGTTCA CGCACCTACC GTTTGGCAAG ATTATTTATG GGTCTATATA
TTTGCTGCAG CCATAGGTTT TAGCACGACC ATAGCCGAGC CTTCGTTAAT TGCGGTTGCG
ATTAAAGCGA ATGAGGTATC GGCTGGAGCC ATTGGTGTAC AGGGGTTACG GATATCGGTG
GCTATCGGTG TCTCTTTTGG TATCGCGTTA GGTTGTTTTC GGATTGTCGT TGGCGATCCG
ATTCATTATT ACATCATGGC CGGGTATGTC ATTGTGGTTA TCCAGACTTT TTATGCCCCT
AAGCTCATCG TGCCATTGGC TTATGACTCG GGAGGGGTGA CAACATCAAC GGTTACCGTC
CCCTTAGTTG CGGCTTTGGG CTTAGGTTTA GCCACAAATG TAGAGGGGCG AAACCCGCTT
ATCGATGGGT TTGGTCTGAT CGCTTTTGCC AGCTTATTTC CCATGATATC TGTGATGGGA
TATGCACAAA TAGTTGAAAA ATTAAATAAG AGACGTTCGT TAAAGGAGCA AAAAGATGCG
CTTTAA
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| Protein sequence | MLTNLLTTFL LTARDVIPIA VILFGFQLGV LKRPIANLRQ VVLGFVYVIV GLSLFLVGLE
LALFPIGESM AEQLTSPEFI HPEAGVHAPT VWQDYLWVYI FAAAIGFSTT IAEPSLIAVA
IKANEVSAGA IGVQGLRISV AIGVSFGIAL GCFRIVVGDP IHYYIMAGYV IVVIQTFYAP
KLIVPLAYDS GGVTTSTVTV PLVAALGLGL ATNVEGRNPL IDGFGLIAFA SLFPMISVMG
YAQIVEKLNK RRSLKEQKDA L
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