Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1816 |
Symbol | |
ID | 5612479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2191396 |
End bp | 2192310 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640932692 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001473555 |
Protein GI | 157374955 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAA TTAATCGCAG CCTGTTTGAT ACCTGTGATC TACTCGAAGG TGCCAGTATT CAATATGGTC CAAACAGCAG CCGGGTTTAT TTGATGTCGA TGAAGCAAGG TGAACCGACC TGTCTGCCGG CCGCCATGTA TCAATTAGCC AAAGCACAGG GTTATGGCAA ATTAATAGCC AAGGTTCGCC AATGTGAATC GGAGCATTTT TTCAACCACG GCTTTACCGA GGAAGCACGC TTGCCAGGGT ATTACCCTGC CATTGGACAG AGTGAAGGTG TGGGTGAATG TGCGGGCGCA AATGTGGGTG AAGAGGCAGG TGAAGATGCG TTATTGTTAG GTGCATATCT GGACTCTGAA CGCCAGATAG ATACCAAAAC TGCAGAGCAT GAAAAAGTAC TCACTCTGGC CCGCAATAAT CTCTCCAAGG TAACGCCAGC TCCTGATTGG CAGGTTATCC CATTGGATGA AGTGTACGTT GAAGAGATGG CCCATATGTA TCGAGAGGTC TTCCCAAGCT ATCCCTTCCC TATTCATGAG GCTGGCTATC TACGTGAAAC CATGTCCGAT AATGTCAGTT ATTTTGGCAT CAAACACCAG GGTCGATTGA TCGCCTTAGC CTCTGCCGAG CAGGATTTGG ATAATATGGC TGTGGAGATG ACGGACTTCG CGACTTCACC TGAATTCAGA GGGCAGCAAC TGGCGGCGGC GCTACTGAAT AAGATGGAAT CTTGCATGGA GCAGCTGGGC TTTCGTCAGG CTTTTACCAT CGCCCGCGCG GGTTCAGTTG GTATGAACAG GACATTTGCC AAACATGGCT ACCACTATCA GGGACGGCTG ATTAACAACA CTCAAATCAG TGGCCAGATA GAAAGTATGA ATATCTGGTC TAAACCACTC AGTCCTGAAT GCTGA
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Protein sequence | MNEINRSLFD TCDLLEGASI QYGPNSSRVY LMSMKQGEPT CLPAAMYQLA KAQGYGKLIA KVRQCESEHF FNHGFTEEAR LPGYYPAIGQ SEGVGECAGA NVGEEAGEDA LLLGAYLDSE RQIDTKTAEH EKVLTLARNN LSKVTPAPDW QVIPLDEVYV EEMAHMYREV FPSYPFPIHE AGYLRETMSD NVSYFGIKHQ GRLIALASAE QDLDNMAVEM TDFATSPEFR GQQLAAALLN KMESCMEQLG FRQAFTIARA GSVGMNRTFA KHGYHYQGRL INNTQISGQI ESMNIWSKPL SPEC
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