Gene Ssed_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1816 
Symbol 
ID5612479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2191396 
End bp2192310 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content49% 
IMG OID640932692 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001473555 
Protein GI157374955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA TTAATCGCAG CCTGTTTGAT ACCTGTGATC TACTCGAAGG TGCCAGTATT 
CAATATGGTC CAAACAGCAG CCGGGTTTAT TTGATGTCGA TGAAGCAAGG TGAACCGACC
TGTCTGCCGG CCGCCATGTA TCAATTAGCC AAAGCACAGG GTTATGGCAA ATTAATAGCC
AAGGTTCGCC AATGTGAATC GGAGCATTTT TTCAACCACG GCTTTACCGA GGAAGCACGC
TTGCCAGGGT ATTACCCTGC CATTGGACAG AGTGAAGGTG TGGGTGAATG TGCGGGCGCA
AATGTGGGTG AAGAGGCAGG TGAAGATGCG TTATTGTTAG GTGCATATCT GGACTCTGAA
CGCCAGATAG ATACCAAAAC TGCAGAGCAT GAAAAAGTAC TCACTCTGGC CCGCAATAAT
CTCTCCAAGG TAACGCCAGC TCCTGATTGG CAGGTTATCC CATTGGATGA AGTGTACGTT
GAAGAGATGG CCCATATGTA TCGAGAGGTC TTCCCAAGCT ATCCCTTCCC TATTCATGAG
GCTGGCTATC TACGTGAAAC CATGTCCGAT AATGTCAGTT ATTTTGGCAT CAAACACCAG
GGTCGATTGA TCGCCTTAGC CTCTGCCGAG CAGGATTTGG ATAATATGGC TGTGGAGATG
ACGGACTTCG CGACTTCACC TGAATTCAGA GGGCAGCAAC TGGCGGCGGC GCTACTGAAT
AAGATGGAAT CTTGCATGGA GCAGCTGGGC TTTCGTCAGG CTTTTACCAT CGCCCGCGCG
GGTTCAGTTG GTATGAACAG GACATTTGCC AAACATGGCT ACCACTATCA GGGACGGCTG
ATTAACAACA CTCAAATCAG TGGCCAGATA GAAAGTATGA ATATCTGGTC TAAACCACTC
AGTCCTGAAT GCTGA
 
Protein sequence
MNEINRSLFD TCDLLEGASI QYGPNSSRVY LMSMKQGEPT CLPAAMYQLA KAQGYGKLIA 
KVRQCESEHF FNHGFTEEAR LPGYYPAIGQ SEGVGECAGA NVGEEAGEDA LLLGAYLDSE
RQIDTKTAEH EKVLTLARNN LSKVTPAPDW QVIPLDEVYV EEMAHMYREV FPSYPFPIHE
AGYLRETMSD NVSYFGIKHQ GRLIALASAE QDLDNMAVEM TDFATSPEFR GQQLAAALLN
KMESCMEQLG FRQAFTIARA GSVGMNRTFA KHGYHYQGRL INNTQISGQI ESMNIWSKPL
SPEC