| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1812 |
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| Symbol | |
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| ID | 5612520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2184417 |
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| End bp | 2185265 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932688 |
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| Product | peptidase M23B |
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| Protein accession | YP_001473551 |
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| Protein GI | 157374951 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0863419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTCTG TGTCACTGAC ACTCTTGTCC TTGGTGACGA CGAGTCTGCT AATCCCATCT
GAGGTAAGCG CACAAGTGCA ACTTACTGGA CAAATGGAGC AAGGCGCCTT AATTCGTGGC
CAAGTAACAC CGGGCACGAC TGCATCTTTA AATGGAGAAG CATTGAAGGT GACGCCTCAG
GGGGCTTTTG CCTTTGGTTT TTCTCGTGAT GCTGAACTTA AACAAGAATT AAGGTTAGTC
TATCCCGATG GTTTAACACA GATTAAGCCA CTGTCGATTC TTGCCAAAGA GTACAAAATA
GACAGATTGA CCGGGATCAG TAAGAAGATC ATGAAGCCGG ATCCTAAGGC GCAGGCGAGG
GCGGCGAAAG ATAGTAAGCA GGTTAAGGCG GCAAGGGCGC AATTTTCCGA TAAAACGGCT
TTCAGTCAGG ATTTTATCTG GCCTCTGACA GGCAGAATAT CCGGAGTTTA CGGCAGTCAG
CGTGTCTATA ACGGTAAGCC GGGCAACCCT CATTATGGCG TCGATGTTGC GGCTAAAACC
GGAACGGTTG TGGTTGCACC CGCCGATGGG AAGATCAGCC TCTCGGTGCC CGATATGTTC
TACTCTGGCG GAACCATCAT CTTAGACCAT GGTTACGGCG TGAGCTCGAG CTTCCTGCAT
CTCAGTAAGT TATACGTTAA AGAGGGGCAG GAGATTAAAC AGGGACAACC CATCGCCGAG
GTTGGCGCTA CCGGTCGTGT AACCGGGCCG CACCTCGATT GGCGGGTTAA CTGGTATCAG
ATGCGATTAG ACCCCGTGAC TATAGTGCCC TCTATGGCCA CTGTGCTTAA ACAGCAAAAG
AGCCAATGA
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| Protein sequence | MRSVSLTLLS LVTTSLLIPS EVSAQVQLTG QMEQGALIRG QVTPGTTASL NGEALKVTPQ
GAFAFGFSRD AELKQELRLV YPDGLTQIKP LSILAKEYKI DRLTGISKKI MKPDPKAQAR
AAKDSKQVKA ARAQFSDKTA FSQDFIWPLT GRISGVYGSQ RVYNGKPGNP HYGVDVAAKT
GTVVVAPADG KISLSVPDMF YSGGTIILDH GYGVSSSFLH LSKLYVKEGQ EIKQGQPIAE
VGATGRVTGP HLDWRVNWYQ MRLDPVTIVP SMATVLKQQK SQ
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