| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1809 |
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| Symbol | |
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| ID | 5612563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2181518 |
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| End bp | 2181733 |
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| Gene Length | 216 bp |
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| Protein Length | 71 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932685 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473548 |
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| Protein GI | 157374948 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3082] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0011331 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTATCC AATCTAAATA TTCAAACACA CAAGTTGAAT CAATTATCGC CGAAGTCAGC
GCCGTACTTG ATAAGCACCA GGCCCCTACC GACCTGAGAC TCATGGTGCT TGGAAACTGC
GTCACCGATC TTTTGGCTCG CAAAGTTCCT CAAGAAGCGA GAGCTGCCGT TGCAGAGCAA
TTTTCTAAGG CACTTGCGCA ATCTGTTAAA GGTTAA
|
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| Protein sequence | MAIQSKYSNT QVESIIAEVS AVLDKHQAPT DLRLMVLGNC VTDLLARKVP QEARAAVAEQ
FSKALAQSVK G
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