| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1804 |
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| Symbol | |
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| ID | 5612714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2172578 |
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| End bp | 2174047 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932679 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473543 |
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| Protein GI | 157374943 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA TCGTTATCGG TTCGACTAAA CACCTTATTC TGGCGCTCAT TTATGCTTCG
CTTGGAATAA CAGTCGCATT GCTTGCCGTG GGAGTCTGGT TGTTAAATTC CAGGCCAGAA
CTTGATATTT GGCATACAAC ACAATTGACT TCTCAGTATA ACAGAAGCCT TGAACTTACT
AATTTCACAG AATATCAAAA ACTTGAAAAG CAGCTTTTTG AAGAACTCGA GTCCGAGATC
TACAGTCACA CCTCCGGTCC ACATTCATCA ATATTAAATC GTTATGTACA TGGCAGTTTA
GCCGCCCCTG AAAAGTGGCG AAATGATTGG AATAGAACTT ACGAGTGGCC GCTGGATGAT
GCCAAATTTG GTGTCCTTCT GCTTCATGGC ATGTCTGACT CTCCCTACGC CTTATCCCAC
GTAGCAAAGC ATTTTGAGGG GAAGGCGCAT CTGCTTGGTT TGAGGCTACC GGGCCATGGC
ACCATACCTT CGGGGCTGGT GGATCTTGAA TGGCAAGATA TGGCATCTGC GGTATCGCTT
GCCACCAGGC ATATGCGAGA TGTACTGAAA GGGCGGCCAC TGTATGTGGT TGGATTTTCG
ACGGGGGCAG CCTTGGCGTT AAACCATGAA TTGGAGCGAC TCTCGAAAAG CCAGGAGAGG
GATTATGCCG GGATGATATT TATCTCTCCG GCTATAGGTT TACCGCCCGT GGCAGCAGGA
GCAAAGTGGC AAGCACGTTT AGGGCAGATG TTAGGGTTAG AAAAACTCAG TTGGAATAGT
ATTCAAACGG AATATGATCC GTTCAAATAT AACTCTTTTG CGGTGAATGC TGGTGATGTG
GTCTACCGGC TTGCCGAGCG TAATCAAGCT ATTATGGATA TGCTGTCGGC AGAGCAGTTA
TTATCTATGC CACCAATATT ATCGTTTCAG TCTATTACCG ATGCTACGGT TTCGAGTTTG
TCAGTTATCT CAGATCTCTA TCTGCGATTG CCCGATAATG GTCACCAATT GGTGATGTTC
GATATCAATC GAACTCAAGT CAATATGGGG TTAATCCCTC ACGATCCCTT AACGCCCATC
AGCGGCGTGA TAAACAAGGA AAATTTACCA TTTGATTTCA CCTTGATCGA AAATATCGAT
GCTGTAAACG AAGATAGGCG ACGTGTTCAG GCGACAACTC ACTCTGCCGA TATGGGACTC
AAAGTCACTT CCTTAACGCA AAGGTGGCCA AGAAATGTTT ATTCTCTCTC TCATGTTGCT
CTGCCGTTTC CTATCGAAGA TAGTTTGTAC GGTCCGGAAG GAGTGCATTT TATTGAGCGG
GTTCAAATCG GTGCGGCATC ATCTCGGGGG GAGAGAGGCG TTTTAAGTGT TCCAGCGGCC
GAGATTTTAA GACAGAAATG GAATCCCTTC TTCCCATATA CTATCCAAAA AATGGATGAC
TTCTTGTTAT CTCTGGAAAA TGAACCTTGA
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| Protein sequence | MKTIVIGSTK HLILALIYAS LGITVALLAV GVWLLNSRPE LDIWHTTQLT SQYNRSLELT
NFTEYQKLEK QLFEELESEI YSHTSGPHSS ILNRYVHGSL AAPEKWRNDW NRTYEWPLDD
AKFGVLLLHG MSDSPYALSH VAKHFEGKAH LLGLRLPGHG TIPSGLVDLE WQDMASAVSL
ATRHMRDVLK GRPLYVVGFS TGAALALNHE LERLSKSQER DYAGMIFISP AIGLPPVAAG
AKWQARLGQM LGLEKLSWNS IQTEYDPFKY NSFAVNAGDV VYRLAERNQA IMDMLSAEQL
LSMPPILSFQ SITDATVSSL SVISDLYLRL PDNGHQLVMF DINRTQVNMG LIPHDPLTPI
SGVINKENLP FDFTLIENID AVNEDRRRVQ ATTHSADMGL KVTSLTQRWP RNVYSLSHVA
LPFPIEDSLY GPEGVHFIER VQIGAASSRG ERGVLSVPAA EILRQKWNPF FPYTIQKMDD
FLLSLENEP
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