| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1799 |
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| Symbol | |
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| ID | 5613228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2168088 |
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| End bp | 2169320 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932674 |
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| Product | metal dependent phosphohydrolase domain-containing protein |
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| Protein accession | YP_001473538 |
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| Protein GI | 157374938 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAA ATCATAGATT TGATTCAAAC CATCAAGATA TAGAGATCCC CATAGCCAAG
CTAAAACCCG GTATGTATGT CGTCTCAATT TCGAGTGAGA ATGGGAGTAT CAGCGTTAAA
TCTGAAGGGT ATGTGCTTAA TGCAGCCAGT ATTAATCAAC TGATCCAATC GGGGATATCC
CATGTCGTCG TCGATCCATC CAGAGAAAAG AAAACAGAAA AAATTGATAA AGTGTTGCCG
GATATCGGCG CGAGGGCTTT AGATAAGAGC AGAGAAAAGC CCGAGATCTC TCTGGAACAG
GAGATGAAAG CGGCGAATAA GCTCTATAAC AATGCGAAAA GTTTGCAGCA GAAGATGATT
CACGCCATCA CCGATGGCAA GGTGATCGAT ATTGAAGGAA TACAGGAAAG CACCGATGCC
ATTGTCGATT CGATATTCAG AAATCAAGAT GCACTCTCCT GTTTATCACG ATTAAGGATT
AAGGATGACT ACTTAGTCGA GCATTCACTC AATGCTTCTA TCTTAATGAC GATATTTGCA
AAGCATCTGG ATGTCGACAG AGCGACGATT GAACAACTCG CCCTCGGTGC TTTCTTGCAT
GATATAGGTA AGGCGATGAT CCCCGATGAG ATCCTCAATA AACCGGGTAA ACTCACATCA
CCTGAATATG AGATCATAAA GAATCATGTA TCGCTTGGCG TTAATATTTT AGAAGATACG
CCGCATATCT CCCATATGGT GATGAGTATG ATAAAAGAAC ACCATGAGCG CATCGACGGC
AGCGGTTACC CATTACAATT AACCGCCGAC TCAATTTCAA AGTTCGGCCG TATGATCGCA
ATTGTGGACA GTTACGATGC CATGACGGCC GAGCGGGTTT ATAGGTCCGG GCTTCATCCG
ATCACCGCGT TTAAAAATCT GATCAAAGAG TCACCGTCCT GTTACGACGA TGCTCTGGTA
GAGCAATTTA TTCAATGTTT AGGCGTCTAC CCTGTTGGTA CACTGGTCGA ACTCAACAGT
GGCAAGCTTG GCCTGATTAG CAGATTAAAC AGGAAGAAGC CGCTACACCC TTATGTTCGT
GTGTTCTATA ACACACGATT AAAACAAGCG ATTGCGATGG AAGAGGTGGA TCTGAGCCGC
TCAAAATACA AAGATCAGAT CGATCGCTGC ATTAAACCTG AGGAATTTAA CATTAACCTG
CTCGGCTTCT TTAAAGCCGC ATTTCTTGAT TGA
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| Protein sequence | MSKNHRFDSN HQDIEIPIAK LKPGMYVVSI SSENGSISVK SEGYVLNAAS INQLIQSGIS
HVVVDPSREK KTEKIDKVLP DIGARALDKS REKPEISLEQ EMKAANKLYN NAKSLQQKMI
HAITDGKVID IEGIQESTDA IVDSIFRNQD ALSCLSRLRI KDDYLVEHSL NASILMTIFA
KHLDVDRATI EQLALGAFLH DIGKAMIPDE ILNKPGKLTS PEYEIIKNHV SLGVNILEDT
PHISHMVMSM IKEHHERIDG SGYPLQLTAD SISKFGRMIA IVDSYDAMTA ERVYRSGLHP
ITAFKNLIKE SPSCYDDALV EQFIQCLGVY PVGTLVELNS GKLGLISRLN RKKPLHPYVR
VFYNTRLKQA IAMEEVDLSR SKYKDQIDRC IKPEEFNINL LGFFKAAFLD
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