| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1788 |
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| Symbol | |
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| ID | 5613290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2155417 |
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| End bp | 2156682 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640932663 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_001473527 |
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| Protein GI | 157374927 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.979757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA ACCGTAAAGT CTCCGTCGAA CAGTTACAAG TGGGCAATTT TGTCCGGCTG
CCGGTTTCAT GGAAAGATCA CCCCTTTTTA TTTAGTAGCT TTAGAATCAA ACAACAGGCA
CAAATCGAAC TTATAAAAAA ATTAGGCATC ACCCATGTTT TTGTCGATCT ACAACGCAGC
GACGTCTCTG TATTAAATGA GAGTGAAGCT AAAGAGCAGA AGCTCGAAAT CAATCAAGAA
GAACTCGATC GTCTGACAAA AAACATGAAT AAATATAAAG GCGAGCGCAT TGAAAGTTTG
AAAAAAATGC GCCGGGATCT ACAAAAAACT GAAAAGGAGT TTGACCGTTC GATCGCCAAG
ATGCGTAACT TAGTCTCTAA GCTGCGTAAT CGCCCCCTCA ATGCTATCGA TGATGCCAAA
GAGTTAATCA ATGATCTCAG TGATCAATTA CTTAATTCAG ATAATTTAGT GCTTCACCTT
ATGGGCGAAG CCAAGAATGA TGAGACCATC TACTACCATT CACTCAATGT GGCAGTCCTC
TCGATGTTGA TGGCAAAAGA GTTAGGCTGG ACTAAAGAAG AGATGGAATT AGTAGGAATT
GGCGCGCTTT TCCACGATAC CGGTAAACTT AAAGTACCAC CTCAGCTATT AAGAAAGAAA
ACACCGTTAA CGGCGCCTGA AAATAATTTT ATGAAGCAGC ACCCGATCAT GGGCGCAGAT
CTGCTTAAAC TTGCCGATAA CTTTCCTGCA GAGGCTCTGC CCATAGTCGT TAACCATCAT
GAATATCTCG ACGGTTCGGG CTACCCTAAG GGGCTTAAGG CTGAAAGCTT AGACAAGTTA
TGCCAGTTAG TAACTGTCGT TAACCTTTAT GATTCTTTAT GTCACCCTAA CTTTCAGAAT
AAAGCTCGCA CCCCTTATGC TGCTCTGGGA CATATCTTTA AGAACTTTAA AACGCAGTTG
AATCAGGAAG TTACCGGTAA AATGATAAAA ATGCTCGGGA TCTACCCGCC CGGCAGCATA
GTTGAGTTAT CATCTGGTCA GTTTGCTATG GTGATGTCGG TAAACTTAGA TAAGATCCTC
TTTCCGAGAA TTCTTGCTTA CGATGCTCTG GTTCCGAAAG ATCAGGCTCC TATCGTAGAT
CTCGAAGCCG AAGGACTCAG TATCGTTCGA TGCCTCCCCC CCGCGGCCCT ACCTGAGAAA
ATTTTTAAAT ATCTGAATCC CAGAGAAAGA GTCAGTTATT TCTTAGGTTC CGATAGTAAA
GCCTAG
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| Protein sequence | MNKNRKVSVE QLQVGNFVRL PVSWKDHPFL FSSFRIKQQA QIELIKKLGI THVFVDLQRS
DVSVLNESEA KEQKLEINQE ELDRLTKNMN KYKGERIESL KKMRRDLQKT EKEFDRSIAK
MRNLVSKLRN RPLNAIDDAK ELINDLSDQL LNSDNLVLHL MGEAKNDETI YYHSLNVAVL
SMLMAKELGW TKEEMELVGI GALFHDTGKL KVPPQLLRKK TPLTAPENNF MKQHPIMGAD
LLKLADNFPA EALPIVVNHH EYLDGSGYPK GLKAESLDKL CQLVTVVNLY DSLCHPNFQN
KARTPYAALG HIFKNFKTQL NQEVTGKMIK MLGIYPPGSI VELSSGQFAM VMSVNLDKIL
FPRILAYDAL VPKDQAPIVD LEAEGLSIVR CLPPAALPEK IFKYLNPRER VSYFLGSDSK
A
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