| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1786 |
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| Symbol | |
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| ID | 5613288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2154002 |
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| End bp | 2154949 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640932661 |
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| Product | magnesium and cobalt transport protein CorA |
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| Protein accession | YP_001473525 |
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| Protein GI | 157374925 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0598] Mg2+ and Co2+ transporters |
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| TIGRFAM ID | [TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.228949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAACTG CTTATGTCTA CCAAGATCGC AAACTTACGA TTAATGAACT ACATATTCAG
GATATAGTCC CTCCGGGTAC GTTATGGCTC GATCTTTTTA AACCGTCCGA TTCCGAGCGT
GAATGGTTAA GTCATTATTC GGTGGAAGAA GTTCCTGAAG AAGATGATAT CAATGAGATT
GAAGCATCTG CACGTTTTTA TCAGAACAAC GATGGTCTTC ATATTAACTC ACTTTTTCCT
CAACGTGTGG GTCAAGATGT TCGTGGCGTA AACGTCTCTT TCAACTTGCG AAAGGACTTT
CTGCTTACTA TCCGTGAAGA GGATGTGGGG CTTATACGTT TACTACGTAA TTACCTCAGA
CTCGGCAGGC TAGAAGTGAC GACCCCTCAG GCGCTATTTC TTGAGCTGTT TAATCTCAAA
GTGGATTACC TCTCAGATCT CATTGAGGAT GTCTATTCTG TTGTAGATGG AGTGAGCGAG
CAGGTATTCG AAAATGATGA ACTCGATGAC GTATTTAAGT TGATCACACT GCAGGAAGAC
TCAAACGGTA AGATTCGTCT GAGTTTGCTT GATACTCAGC GCTCGTTAAG ATACATGCAA
CGATATTATC GTGGACAGCT GACCGATGAT AATCTAAAAG ATCTTCGTGA GATGTTGTTA
GACATTGAAT CTTTGATGCC GCACAGCCAA TTTATCTTCG ATAAGTTAAA CTTTTTACTC
GATGCGGCTA TGGGCTTTAG TGGTTTACAG CAGAACAAGA TCATTAAAAT ATTTTCAGTT
GCAGCGGTCA TTTTTCTACC ACCAACAGTA ATTGCAAGTG CTTATGGTAT GAACTTTACC
AATATGCCAG AGCTCGATTG GCGTTTTGGA TACCCTATGG CAATTCTGAT GATGATAGCG
AGTGCAGCCG GAACCTATCT GTTTTTTAAA CGTAAAGGCT GGTTATAA
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| Protein sequence | MITAYVYQDR KLTINELHIQ DIVPPGTLWL DLFKPSDSER EWLSHYSVEE VPEEDDINEI
EASARFYQNN DGLHINSLFP QRVGQDVRGV NVSFNLRKDF LLTIREEDVG LIRLLRNYLR
LGRLEVTTPQ ALFLELFNLK VDYLSDLIED VYSVVDGVSE QVFENDELDD VFKLITLQED
SNGKIRLSLL DTQRSLRYMQ RYYRGQLTDD NLKDLREMLL DIESLMPHSQ FIFDKLNFLL
DAAMGFSGLQ QNKIIKIFSV AAVIFLPPTV IASAYGMNFT NMPELDWRFG YPMAILMMIA
SAAGTYLFFK RKGWL
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