| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1784 |
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| Symbol | |
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| ID | 5611775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2152549 |
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| End bp | 2153244 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932659 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473523 |
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| Protein GI | 157374923 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3110] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.215532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACACC TCACCTTATT GGCCAGTCTT TCCACAATCA CAACATTACT CTTCGCCTCA
CAGGCTTGGG CAGAACCCAC CATCAGTTTT CCAAATTCTG CAGAGTTATT GGTAGTGAAC
GGCAAAGCCG CTGAATCAGA CTCTCCGATG ACACTCCGTG AGGGTAAAAA CCAGATAGTA
CTTAAATACA ACACGAGCTT CAGACAACAG GGACAACAGA AAAGGTTTTC ATCGGAAGCT
ATCATTGTAA GTTTTGAAGC TAGCAATCAA ACCTACAAGC TAATCTTACC TAAATTGAAA
TCCAGTAGTG ATGCCGACAA ATTCAATTCA ACTCCTGCTA TTAAGCTCTC AGATAATAAA
GGCCAGGCAG TAAACTACGA CACAGACATT CTAACCAAAG AGGGGTTGCA GTTAGGCCGG
GATTACAGCA ATGAAATATC TGTCTATAAC CAGAGTGGAG CGAATGCCGC TGTGAGTCAC
TTTGCTGTTA TAAAGCAAAA TACGAAGGTT CAGAGCGCCG CAGATGTTAC AACCTCAGTC
TCCACAACGT CTGAGACCAT GGTAAACAAG CAAGCCACGA CTCAAAACAA TCAGATACCC
GATCAGATTA ATGTCGGTCA GATGCTCGAC TTCTGGTACA GCCAAGCCGA TGAAGAGACA
CGAAAAGCCT TCAAGGCTCG CATTAAAAAT AAGTAA
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| Protein sequence | MKHLTLLASL STITTLLFAS QAWAEPTISF PNSAELLVVN GKAAESDSPM TLREGKNQIV
LKYNTSFRQQ GQQKRFSSEA IIVSFEASNQ TYKLILPKLK SSSDADKFNS TPAIKLSDNK
GQAVNYDTDI LTKEGLQLGR DYSNEISVYN QSGANAAVSH FAVIKQNTKV QSAADVTTSV
STTSETMVNK QATTQNNQIP DQINVGQMLD FWYSQADEET RKAFKARIKN K
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