| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1779 |
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| Symbol | |
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| ID | 5610812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2138615 |
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| End bp | 2139853 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932649 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473518 |
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| Protein GI | 157374918 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCATA CCGAGACCGG CCCTAAAGAG CTCCCCCTGG CCAGACGTAT CGGCCTGCCT
TTACTGACAT TTTATGGTCT GGGGACCATG CTTGGCGCGG GCATCTACGT TCTGGTGGGA
AAAGTGGCTG CCAGCGCGGG TATGCTCACC CCCCTTGCTT TTATGGTCGC AGCAATCATC
GCTTATTTTA CCGCCCTGAG TTACTGTCAG CTGGTTGCTC GCTACCCCCT AAGCGCTGGC
GAGGCCTGTT ATGTGGAACA TGGGTTTAAC AGCAAAATAT ATGGCATTAT CGTCGGCTAT
CTGGTCATTT TGACCGGAAT AGTCTCCTCT GCCACCTTGA TCAATGGCTT CGTAGGTTAC
TTGTCCCATT TTATCGAGCT ACCCGACTAC ATGACCATAA CCTCCATGCT CTTGTTACTA
GGCTTTATCG CGGCATGGGG AATAGCAGAA TCACTCTGGT TGGCGGCAGT GATCACCGTA
ATCGAAGTGC TTGGCTTATT GTTAGTCATT GTCGTAGCCG GTGGAGCTTT ACCAGACTCA
ATCCCCTGGC AACAGGCCTT TATTCCCGAC AATACTCTCG TCTGGGGGGG AATATTGAGC
GGCGCATTTC TGGCTTTCTA TGCCTTTATC GGCTTCGAAG ATATGGTGAA TATTGCTGAA
GAGGTTAAGA CCCCCGAACA GACCATGCCC AGAGGAATAA TACTGGCACT CATCATCGCC
AGCCTGCTCT ATATCATGGT GGCATTTGTC GCCGTTTTCT CACTCCCCCA GAGTGAACTC
GCCGCCTCAA CTGCGCCGCT TAAAGATATC CTCGTACCCC ACCACCCGAT GGCTGGTACC
TTGATAAGCG TAATTAGTCT GTTCGCCATC CTTAACGGCT TGTTGGCTCA ACTGATCATG
GCCTCCAGAG TGCTATACGG CATGGCATTT CAGGGGCGAG CTCCGGCTTT TCTCGCAGCA
GTAGGAAAGA GGACGCAGAC GCCAATCATT GCCACCATAA TCATCACCGC TGTGGTGTTG
ATTTTTGCCC TTTGGCTGCC TCTGGTCACG CTGGCAAAGA CCACCAGCTT TATCATTTTG
ATCATTTTCG CCCTCATTAA CCTTTCTCTA TGGCGAATTC AGCGAAAAGA GCCTGAAGAT
AAGGCTCATA AGAAAGGTGG CTGGCCCCTC ATCGGTACCC TACTCTGTCT GTTCTTGATA
GGCGTACAGA GTTATAACCT GCTATTTGCC GCCAATTAA
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| Protein sequence | MNHTETGPKE LPLARRIGLP LLTFYGLGTM LGAGIYVLVG KVAASAGMLT PLAFMVAAII
AYFTALSYCQ LVARYPLSAG EACYVEHGFN SKIYGIIVGY LVILTGIVSS ATLINGFVGY
LSHFIELPDY MTITSMLLLL GFIAAWGIAE SLWLAAVITV IEVLGLLLVI VVAGGALPDS
IPWQQAFIPD NTLVWGGILS GAFLAFYAFI GFEDMVNIAE EVKTPEQTMP RGIILALIIA
SLLYIMVAFV AVFSLPQSEL AASTAPLKDI LVPHHPMAGT LISVISLFAI LNGLLAQLIM
ASRVLYGMAF QGRAPAFLAA VGKRTQTPII ATIIITAVVL IFALWLPLVT LAKTTSFIIL
IIFALINLSL WRIQRKEPED KAHKKGGWPL IGTLLCLFLI GVQSYNLLFA AN
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