| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1770 |
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| Symbol | |
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| ID | 5613417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2126997 |
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| End bp | 2128337 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640932640 |
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| Product | guanosine polyphosphate pyrophosphohydrolase/synthetase |
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| Protein accession | YP_001473509 |
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| Protein GI | 157374909 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC TAGTCAAGTC AGCGCAACAC TTTGCAACCC AAGCTCACAC CCAAATAAAC
CACTTAAGGA AGTATACAAA ACAGCCTTAT CAAATGCATT TGAAGAGGGT GGCACAAACC
GTATCTGAAA TAACAGATGA CCCAGAGATC ATTGCAGCAG CCTGGTTGCA TGATACCGTT
GAAGACACCC CAGCAACATT TGAAGATATT GAATTAAATT TTGGTTCTCG GGTTGTACAG
TTTGTTTTTG ATCTGACTGA TGTGAGTCGC CCAAGTGATG GCAGTCGTGC CCTACGTAAA
GCAATAGACC GCGAACACCT TAGCCAAGCA TCCCCTGCAG CCAAAACTAT AAAACTTGCA
GATTTAATAG ATAATTGCGC CGACATTTGT AAACATGATG AACGATTTGG ACGAGTGTTT
GTTGTTGAAA TGCAGCAATT ATTGCCTCAT TTAGTTGACG GGGATGAACG TCTTTATCGA
CGGGCAGAGC GCCTTTGCAG TAAGTGGGCT GAAAAATGGT CAATACCACC TTCTGCCGGG
ACTACATGGG TAGAGCCCCC TGCTCTCCAT GCGACGAGAG ATCTATTTTC AAATCGTAAA
TTACAGCGGC TGTTCGGTGA AATGTTTTGC GCGCGGGATG TTGCTGAATC TCTCCCTTCT
TATGACTGGA ATATTTCCGA AAGGGAATTA GTGCACCTCC TGAGCAACGG CGATGTTTCT
GTAATAGGTT TAAGGAGATC AGGGTTTGTT TATGGTTATG TTCTGTTGGA TGAAACAAAC
AAAAAACCAA CCTGTCTTAA ACGACGTTTT ATGGATGCCC AACTGGTTGA TATAGATACC
CCTTTATTAA ATGTTATTGC CATTCTTGTG CATCATCAGT TTTGTTTTGT TAGCAGTATG
GGACAGGTGG CAGGTGTTAT TTCCAGAAAT GATATTCAAA AACCAGCCGT ACGCATGTGG
CTCTTTGGTT TAATCACCTT AACCGAGCAA TATATGGCCG AGCAGATTAA GCTTATTTGG
CCTAACGAAG AATGGTTTAA GTTTACAAGC TCTGCTAGGC TGGCTAAATC CAAAGAACTT
AAAGAAGAGC GAGAGCGTAG AGGGCAGAAG TGTGATTTGC TTGATTGCGT CCAGTTATCA
GATAAAGCCC TTATTCTTAT TGAAGACACA GGTTATATGG AACGATTCGG CTTTAGTTCA
AGACGAGAAG CTAAAACCGC AATTAAAGAA GTAGAATCTC TGCGCAATAA TTTAGCCCAC
GGACAAGATA TTGTTTCATA TGATTGGCCA CAAATCATTC GAATGACATC ACGAGTAAAT
GAAACACTGT CTAATCGTTA A
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| Protein sequence | MKLLVKSAQH FATQAHTQIN HLRKYTKQPY QMHLKRVAQT VSEITDDPEI IAAAWLHDTV
EDTPATFEDI ELNFGSRVVQ FVFDLTDVSR PSDGSRALRK AIDREHLSQA SPAAKTIKLA
DLIDNCADIC KHDERFGRVF VVEMQQLLPH LVDGDERLYR RAERLCSKWA EKWSIPPSAG
TTWVEPPALH ATRDLFSNRK LQRLFGEMFC ARDVAESLPS YDWNISEREL VHLLSNGDVS
VIGLRRSGFV YGYVLLDETN KKPTCLKRRF MDAQLVDIDT PLLNVIAILV HHQFCFVSSM
GQVAGVISRN DIQKPAVRMW LFGLITLTEQ YMAEQIKLIW PNEEWFKFTS SARLAKSKEL
KEERERRGQK CDLLDCVQLS DKALILIEDT GYMERFGFSS RREAKTAIKE VESLRNNLAH
GQDIVSYDWP QIIRMTSRVN ETLSNR
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