| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1768 |
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| Symbol | |
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| ID | 5613415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2124946 |
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| End bp | 2125896 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932638 |
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| Product | meta-pathway phenol degradation-like protein |
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| Protein accession | YP_001473507 |
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| Protein GI | 157374907 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTAA TTAATATGCA GTTTGCAAAA ACAGAAGTTA AGGAAGGACT ACGCGCTTCT
CAAAGTCATC AATTGAAACT GCTGCTCGCC TTAGCTATGA CAGGCTTTGT CAGCCCTACA
TTTGCTGATG GAATCGTAGG CGCTGGCCAT TATGCACCGG CAATTGCCAA TATCCGCGAC
TTAACGGTGC CTGACCAAGC CGGTTTTGTG TATGAGCAAT ACAATTTTTA CTATACAAGT
GACACTCTCA TTGCAAGCTC AGGTAAAGAG GTCAGTGGAG ATCTGAGCTC TGGCGGTATT
GCACCATTGT TTTTGTGGGT GACGGATAGG GAAGTGATGG GGGCACGTTA CAGTTTTTAC
TTCAATCCGG TTTACCTGTC TAACGACTTA GACGGCGAAG AAGACCAGGG CTTGGGTGAC
CTGTACATTC AACCGGTTTG GCTTAGCTGG TTGAATAAGA GTTACGACGT TACTCTGGGG
ATCGGTGTAT ACGCTCCTGT GGGTAATGAG GACGTCACTT TAGATATGTG GACAACTCAG
TTTCAACTTG CCGGATATTA TTACATGATG GATCAGGCGT CAGCCTTGAT GCTTGCGGCT
ACCTATGAAA TTCACAGCGA AGTTGATGAG ACCAAAGTGA CCCCGGGTGA CCACCTCACC
ATCGAGTATG GGTGGAGCCA ATATTTTACC CAGCAATTTG AAGTCGGTAT CCGTGGTTAC
AGTCAGTGGC AAATGCAAAG GGATGACCTG CCGTCCAACC TCAACAACTT GAATCAACTC
TTAGGTACTG ATATCGGAAA TAAATCAGAA GTACATGGAG TGGGCATACA GGCTGCATAT
TGGTTCAATA ATCAATGGAA CCTTGCGTTT AACTACGCCA AAGAATACAG CGCAGAGTCT
CGATTTGAAG GTGAAATGTA TTCACTCAAC ATAACTTACA TGATGAACTG A
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| Protein sequence | MNLINMQFAK TEVKEGLRAS QSHQLKLLLA LAMTGFVSPT FADGIVGAGH YAPAIANIRD
LTVPDQAGFV YEQYNFYYTS DTLIASSGKE VSGDLSSGGI APLFLWVTDR EVMGARYSFY
FNPVYLSNDL DGEEDQGLGD LYIQPVWLSW LNKSYDVTLG IGVYAPVGNE DVTLDMWTTQ
FQLAGYYYMM DQASALMLAA TYEIHSEVDE TKVTPGDHLT IEYGWSQYFT QQFEVGIRGY
SQWQMQRDDL PSNLNNLNQL LGTDIGNKSE VHGVGIQAAY WFNNQWNLAF NYAKEYSAES
RFEGEMYSLN ITYMMN
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