| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1756 |
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| Symbol | pntA |
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| ID | 5610647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2109325 |
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| End bp | 2110869 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932626 |
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| Product | NAD(P) transhydrogenase subunit alpha |
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| Protein accession | YP_001473495 |
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| Protein GI | 157374895 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
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| TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.814968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.67864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCG GAATACCAAG GGAGATCCTC GCGCAGGAGA GCCGGGTAGC CGCGACACCT
GCCACTGTAA TACAGCTTAA GAAATTAGGC TTCAGTGTTG TGGTACAAAG CGGTGCCGGA
GAGGCGGCTA ACTTCAAAGA TGAGGCGTAT CAAGAAGCGG GTGCTGAGGT TGTTAGCCTC
GAACAAGCGT TTCAGGCTGA TCTCATACTA AAGGTCAATG CACCTGGTAT TAATGCAGAC
ACTGGCGTTG ACGAAGCCGA TTTAATGAAA GGCGGTTCGA CAGTGGCAAG TTTTGTATGG
CCAGCCCAGA ACCCAGAGCT ATTGGAAAAG TTTAAGGCTA AAGGGATTAA CCTGCTCGCA
ATGGACATGG TGCCACGTAT TTCTCGTGCC CAGTCTCTCG ATGCGCGTAG CTCGTTAGCA
AACGTTGATG GTTATCGCGC CGTCATCGAA GCGGCGAACC ATTTTGGCCG TTTCTTTACC
GGTCAAATCA CCGCCGCGGG TAAAGTGCCG CCGGCAAAAG TATTGATTAT CGGTGCCGGT
GTTGCCGGTC TTTCCGCATT AGGTGCAGCC GGTAGCTTAG GTGCAATCGT TCGTGCCTTC
GATACTCGCC CGGAAGTGAA AGAGCAGATT AACTCTATGG GCGCCGAATT CCTGGAACTT
GATTTCGAAG AGGAATCGGG TTCAGGTGAT GGTTACGCCA AAGTTATGAG TAAAGAGTTT
ATCGATGCTG AGATGGCGCT GTTCCGTGAG CAGGCCAAAG ATGTCGATAT TATCATTACG
ACGGCACTTA TCCCGGGCAA ACCCGCGCCT AAACTGATCC TTGAAGATAT GGTTGGCTTA
ATGAAGCCCG GCAGTGTCAT CGTCGATCTG GCTGCGGCCA ACGGTGGTAA CTGCGAACTG
ACGGTTCCCG GCGAAGTCGC AGTGGTCAAT GATGTCACCA TTATCGGTTA TACCGAGCTT
TCACGCCGCC TGCCTACCCA AGCGAGCCAG CTTTACGGTA CTAACTTAGT CAACTTGCTT
AAGTTAATGG TGCCGGAGAA AGACGGCAAC TATGAGATTA ACTTCGACGA TGAGGTTATC
CGTGGTGTTG CTGCGGTTAA AGATGGTGAA ATCACCTTCC CGCCACCAGC AATTCAGGTC
AGTGCTCAGC CTCAGGCTAA AGCAGAGGAA GCGCCTGTCG AAGTGGTCGA GAAGAAAAAG
AACCCTTGGG TTAAACCTGT CATTGCAACC GTTGCAGCTG GCCTGTTCGG TTTAATCGCT
AATTCGGCGC CGGCAGACTT CCTACAGCAC TTCAGCATAT TTGTGCTGTC ATGTGTCGTC
GGTTACTACG TCGTTTGGAA TGTGAGCCAT TCTCTGCATA CCCCTCTGAT GAGCGTAACC
AATGCGATCA GTGGCATTAT CGTTGTCGGT GCCTTAGTGC AGATGAACAG TGATAGTACG
GCGGTGCTGG TCTTGTCTGG CATTGCGATA CTCATTGCCT CGATTAACAT TGCCGGTGGT
TTCACCGTGA CTCAGCGTAT GCTGAAAATG TTCCGTAAAG ACTAA
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| Protein sequence | MQIGIPREIL AQESRVAATP ATVIQLKKLG FSVVVQSGAG EAANFKDEAY QEAGAEVVSL
EQAFQADLIL KVNAPGINAD TGVDEADLMK GGSTVASFVW PAQNPELLEK FKAKGINLLA
MDMVPRISRA QSLDARSSLA NVDGYRAVIE AANHFGRFFT GQITAAGKVP PAKVLIIGAG
VAGLSALGAA GSLGAIVRAF DTRPEVKEQI NSMGAEFLEL DFEEESGSGD GYAKVMSKEF
IDAEMALFRE QAKDVDIIIT TALIPGKPAP KLILEDMVGL MKPGSVIVDL AAANGGNCEL
TVPGEVAVVN DVTIIGYTEL SRRLPTQASQ LYGTNLVNLL KLMVPEKDGN YEINFDDEVI
RGVAAVKDGE ITFPPPAIQV SAQPQAKAEE APVEVVEKKK NPWVKPVIAT VAAGLFGLIA
NSAPADFLQH FSIFVLSCVV GYYVVWNVSH SLHTPLMSVT NAISGIIVVG ALVQMNSDST
AVLVLSGIAI LIASINIAGG FTVTQRMLKM FRKD
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