Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1735 |
Symbol | |
ID | 5609982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2083099 |
End bp | 2083998 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640932605 |
Product | chromosome segregation protein SMC |
Protein accession | YP_001473474 |
Protein GI | 157374874 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.189301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000153461 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGACTCA AACAGATAAA ACTTGCTGGA TTTAAGTCGT TTGTCGATTC AACTAAGATC CCTTTTCTCA ACCCGCTAAG CGCGATCATT GGTCCCAATG GTTGTGGTAA ATCTAATGTC ATCGATGCCG TGCGTTGGGT GCTGGGCGAA AGCTCGGCTA AGCATCTGCG TGGCGACTCC ATGGCCGATG TCATCTTTAA TGGCTCCAGT GCCCGAAGAC CCGTATCGGT CGCCGGTGTC GAGCTCCTGT TTGAAAACCA GGATGGCCGC CTTACCGGGC AATATGCCAG CTATCAGGAG ATCTCGGTAA AGCGGCAGGT GACACGAGAC GGCGACTCCT CCTATTTTCT CAATGGGCAG AAATGCCGCC GCAAAGATAT TACCGATCTA TTTATGGGCA CGGGTTTAGG GCCTCGAAGC TACGCGATTA TCGAGCAGGG GACCATCTCC CGTCTGATTG AGTCTAAGCC TCAAGAGCTG AGAGTGTTCA TCGAGGAGGC GGCAGGGATC TCCCGTTATA AAGAGCGGCG ACGCGAGACC GAAAACCGGA TCCGTCACAC CAGAGAGAAC CTCGAGAGAC TCGGCGATAT TCGCACCGAA CTCGGGCGTC AGCTGGAGAA GTTGGCCGAG CAGGCGAGTG CTGCTAAGCA ATATCGCGAG TTTAAGCAAT CTGAACGAAT ACTGGACTCA GAGCTTTCTG TCAGCCGTTA TATTGAGTTA ACCAGTCAAA CCGAAAAGTT GACCCTGGAG GTAAACAAGC TTGAACTGGA TAAGGCAGAG CTTGATGCCG AAAAAGAGAA AACCGAATTA GCCTTAACCC AGTTGAGTGT GCAGCTGGCG GAACTCGAGC GTGAAGAGCA CAAGCGGGTA GAAGATTTTA CCAATGCGGA AACCAGATAG
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Protein sequence | MRLKQIKLAG FKSFVDSTKI PFLNPLSAII GPNGCGKSNV IDAVRWVLGE SSAKHLRGDS MADVIFNGSS ARRPVSVAGV ELLFENQDGR LTGQYASYQE ISVKRQVTRD GDSSYFLNGQ KCRRKDITDL FMGTGLGPRS YAIIEQGTIS RLIESKPQEL RVFIEEAAGI SRYKERRRET ENRIRHTREN LERLGDIRTE LGRQLEKLAE QASAAKQYRE FKQSERILDS ELSVSRYIEL TSQTEKLTLE VNKLELDKAE LDAEKEKTEL ALTQLSVQLA ELEREEHKRV EDFTNAETR
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