Gene Ssed_1735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1735 
Symbol 
ID5609982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2083099 
End bp2083998 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content52% 
IMG OID640932605 
Productchromosome segregation protein SMC 
Protein accessionYP_001473474 
Protein GI157374874 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.189301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000153461 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGACTCA AACAGATAAA ACTTGCTGGA TTTAAGTCGT TTGTCGATTC AACTAAGATC 
CCTTTTCTCA ACCCGCTAAG CGCGATCATT GGTCCCAATG GTTGTGGTAA ATCTAATGTC
ATCGATGCCG TGCGTTGGGT GCTGGGCGAA AGCTCGGCTA AGCATCTGCG TGGCGACTCC
ATGGCCGATG TCATCTTTAA TGGCTCCAGT GCCCGAAGAC CCGTATCGGT CGCCGGTGTC
GAGCTCCTGT TTGAAAACCA GGATGGCCGC CTTACCGGGC AATATGCCAG CTATCAGGAG
ATCTCGGTAA AGCGGCAGGT GACACGAGAC GGCGACTCCT CCTATTTTCT CAATGGGCAG
AAATGCCGCC GCAAAGATAT TACCGATCTA TTTATGGGCA CGGGTTTAGG GCCTCGAAGC
TACGCGATTA TCGAGCAGGG GACCATCTCC CGTCTGATTG AGTCTAAGCC TCAAGAGCTG
AGAGTGTTCA TCGAGGAGGC GGCAGGGATC TCCCGTTATA AAGAGCGGCG ACGCGAGACC
GAAAACCGGA TCCGTCACAC CAGAGAGAAC CTCGAGAGAC TCGGCGATAT TCGCACCGAA
CTCGGGCGTC AGCTGGAGAA GTTGGCCGAG CAGGCGAGTG CTGCTAAGCA ATATCGCGAG
TTTAAGCAAT CTGAACGAAT ACTGGACTCA GAGCTTTCTG TCAGCCGTTA TATTGAGTTA
ACCAGTCAAA CCGAAAAGTT GACCCTGGAG GTAAACAAGC TTGAACTGGA TAAGGCAGAG
CTTGATGCCG AAAAAGAGAA AACCGAATTA GCCTTAACCC AGTTGAGTGT GCAGCTGGCG
GAACTCGAGC GTGAAGAGCA CAAGCGGGTA GAAGATTTTA CCAATGCGGA AACCAGATAG
 
Protein sequence
MRLKQIKLAG FKSFVDSTKI PFLNPLSAII GPNGCGKSNV IDAVRWVLGE SSAKHLRGDS 
MADVIFNGSS ARRPVSVAGV ELLFENQDGR LTGQYASYQE ISVKRQVTRD GDSSYFLNGQ
KCRRKDITDL FMGTGLGPRS YAIIEQGTIS RLIESKPQEL RVFIEEAAGI SRYKERRRET
ENRIRHTREN LERLGDIRTE LGRQLEKLAE QASAAKQYRE FKQSERILDS ELSVSRYIEL
TSQTEKLTLE VNKLELDKAE LDAEKEKTEL ALTQLSVQLA ELEREEHKRV EDFTNAETR