| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1732 |
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| Symbol | |
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| ID | 5609674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2077861 |
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| End bp | 2080233 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932602 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473471 |
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| Protein GI | 157374871 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000388677 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTCA AGCCCCCCTT CCCCACTCAA TTATCGAGCC TGTTACTGGC CGGTATTATC
GGCGCTTGCG CTTCTTTTTC CACTTATGCC GGCAGCAGTC ACCAGTTCAG CCTCAGCATA
CCGACACTCG AAGATGGCGC GACCATCGAC GGGGATCTCG ATGAGGCGCA GTGGCAAGAT
GCCGCCATCG CCGAGCTAAA ATATGAGACC AGTCCCGGGG AGAATATTTT GGCTCCTGTG
GGGACGACCG CCAAGATATT TTCGACCAGT GAGAGTCTGT TTATCTCTTT TATTGCCCGC
GATCCCGATT CCAGCATCGA TGATGATATT ATCCGCGCGA ATCTCAACGA CAGGGACGAT
ACCTGGGGCG ACGATCTTGT CGGCATTAAG CTCGATACCT TCAATGACTC GAGGCTGGCT
TATCAGTTCT TCGTTAACCC CTATGGTGTG CAGACCGACT CCATCGAGAA TGAACTGACC
GGTGATGAGA GTGATGCCTG GGATGGGATC TGGTACACCA GTGCCCGCAA GACCGAGCAA
GGTTATCAGG TCGAAATAGA GCTGCCACTG AGGCTGTTTA ACTTCGACAG TCAGCTGGGG
GAGCAAACCT GGGGCGTCGA ATTTATCCGC TTCTATCCCA GAGATCAGGT ACGAAGATTA
TCGACCCATC AGATCGACAG AAATAACAGC TGCCAGCTTT GTCAGCTGGG TACAGCGACG
GGGCTTGAGG GCCTTAAACC CGGCCAGGAT CTCCAGTTGA CCCCCTCTTT GGTGTTTAAC
CGAAACAGTC AGCGGGACGC TGAGCCCGGC GCCGATTGGG ACAGTGACAA CTCGGTCGAG
CCCGGTCTGG ATATTCGTTG GGGGATCACC CCGAGCACCC TACTAAGCGC GACCATCAAT
CCCGATTTTT CGCAGGTCGA GGCCGATGCC GGCCAATTAG ATATCAACAG TACCTTTGCG
CTGTTTTATC CCGAGAAGCG TGCTTTCTTT CTGGACAATA AAGATTATTT CGACACTCAA
CTTCAGCTGC TACATACCCG AAATATTGTC TCACCAGATT ATGGTCTGAA ACTCACCAGC
AAGGTCGATA ACCATACCTT CGCGGTGATG GCGAGCAATG ACACCAAAAC CAACTTTCTG
ATCCCCGGTA ACCTGAGCTC TGATATTGCC AGTCTCGATG AGGAGAGTAT TAACCTTGCC
GGCCGTTACC GGGCAGATAT CAGCAATGAA CTCTCTATTG GCACCTTAAT CACGGCTAAG
CGCAGTGACC AGTATCATAA CTACCTTGCC AGCGGAGATC TTAAATATCA GCCCACACCA
CAGGACACCT TCACGGCGCA ATATGTGTTC TCCTCGACCC AATATCCGGA TGAGCTCTAC
AGAGAGTTTT GCTCCGGGAG TGATTGTCTG CCGGACAGCA ATTGTGAGCT CTCGGACTGC
GGCGTCAATG AGCGGGTGTT GCGCACCAAG CAAGAGGGTG AATTCAGTGA CAGCTTTTAT
CACCTCAAGT ACAAGCATGA ACGCCGAAAC TGGTATGCGT TTACCCAGTA TGAATCGGCG
GGTGATGACT TCAGGGCAGA TTTAGGTTTT ATCAGTAGAG TCGATGTCAG TAAGTTGGTT
GCTGGTGGCG GCTATACCTG GTACCCGCAG GACTCCTCGA TTAGCCGTGT CGAACTCGGC
GGCGATTGGG ATATCAGCCA CAATCAGGCG GGAGAGCTGC TGGAGCAGGA GATAGAAGCG
AAAGTCGAAT TTGAAGGTTC GATGCAGAGC TATACCGCCT TTGGCATCGT GGCCAGAGAG
CGTGTGGGTA GACGACACGA TAGCTCACAG CTTGCCATCG ACGGCAACAC CCAGCTATTT
AATGAGACCA AGGCCTGGGG TTACAGTAAG ATCATTCCAA GTAGAGCCCT GACTCTGGAT
CTCGACCTCA GCTATGGCGA TAACATCGAT TTTGCCAATG ATCAGCTAGG AACAGAGCTG
TTTGTGAATC CAGGTGTGGA GTGGAAGATT TCTGATTCTG TGTCGCTGGA CGTCTCACAT
CTCTACCGTG CATTAGATGT CGACGATGGC CGACTCTTCA CCGCTAACCT GAGTGACGTT
CGCCTGAACT GGCACATCAA TCTGCGTAAC TTTATCCGAA TATCCAGCAT CTACACCCAT
ATCGAGAGAG AGCCTTCGCT TTACCTCTAT AGCTCACCGG ATGCAAAAGA GCAGCAACTG
GGTAATGAGG TGTTATACGG GTATAAACTC AATCCCCAGA GTGTATTTTA TTTAGGCTAT
TCAGACGGTT TAAACCGTGA TGATGAGATC GATGCATTGA CCCGCACCGA ACAGACCTAC
TTTATGAAGT TGAGTTACGC CTGGTTATTG TAA
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| Protein sequence | MKFKPPFPTQ LSSLLLAGII GACASFSTYA GSSHQFSLSI PTLEDGATID GDLDEAQWQD
AAIAELKYET SPGENILAPV GTTAKIFSTS ESLFISFIAR DPDSSIDDDI IRANLNDRDD
TWGDDLVGIK LDTFNDSRLA YQFFVNPYGV QTDSIENELT GDESDAWDGI WYTSARKTEQ
GYQVEIELPL RLFNFDSQLG EQTWGVEFIR FYPRDQVRRL STHQIDRNNS CQLCQLGTAT
GLEGLKPGQD LQLTPSLVFN RNSQRDAEPG ADWDSDNSVE PGLDIRWGIT PSTLLSATIN
PDFSQVEADA GQLDINSTFA LFYPEKRAFF LDNKDYFDTQ LQLLHTRNIV SPDYGLKLTS
KVDNHTFAVM ASNDTKTNFL IPGNLSSDIA SLDEESINLA GRYRADISNE LSIGTLITAK
RSDQYHNYLA SGDLKYQPTP QDTFTAQYVF SSTQYPDELY REFCSGSDCL PDSNCELSDC
GVNERVLRTK QEGEFSDSFY HLKYKHERRN WYAFTQYESA GDDFRADLGF ISRVDVSKLV
AGGGYTWYPQ DSSISRVELG GDWDISHNQA GELLEQEIEA KVEFEGSMQS YTAFGIVARE
RVGRRHDSSQ LAIDGNTQLF NETKAWGYSK IIPSRALTLD LDLSYGDNID FANDQLGTEL
FVNPGVEWKI SDSVSLDVSH LYRALDVDDG RLFTANLSDV RLNWHINLRN FIRISSIYTH
IEREPSLYLY SSPDAKEQQL GNEVLYGYKL NPQSVFYLGY SDGLNRDDEI DALTRTEQTY
FMKLSYAWLL
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