| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1728 |
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| Symbol | |
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| ID | 5610107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2073730 |
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| End bp | 2074734 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932598 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473467 |
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| Protein GI | 157374867 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000180313 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTTTAT TCACAGTGGC AGTCAAGTCA TGGACTTTAA ATATTTCTAA AAACATTCTA
ACCAGGAGAG ATAAATTGAA AAACTATAAA CGTTCGCTGC TGTGCCTAGC CGGAATAACC
GGTCTTGTTT TGAATGCCTC TGCCGCCGTT GCGGCGACCT CGGGCTCCCA TTACCCATTG
GGAGGAGAAG GCGTCGCCGC TGGTTCTCCG CCACCACCCG GCTTGCACTA CCGTATGTAC
AACACCTGGT ACAACGCCGA TACCCTGACT GATAATAATG GCGATGATGT CGGCTTGGAT
TTTGATCTGA GCGCTTATGC TCAGATACAT AGATTTGTTC ATATAACAGA AAAGAAAATC
TGGGGTGCAA ACTGGGGCTA TAACGTCCTT ATTCCTATGG TGAGCAAAGA CATCTCGATT
GATCCCATTG GCGTCGATGA CAACACATCT TTCGCGTTAG GCGATGTGAT TCTGGAACCT
CTGGCCCTGT TCTGGTACCG CGAACGTTAT GATGCCATTC TGACATTGGC ACTGATTGCA
CCCACTGGTG ACTATGACTT TAGTGATGCG GCCTCACCCG GTTTAGGATA CTGGTCTGGT
ATGTTGACCG CCGGCGGAAC TTATTATCTG GATACTGAGA AATCCTGGAC CATCAGTGCA
CTGACCCGCA CACTGGTTCA CACTGAGCAG GATGATACCC ATGTTCGTCC GGGAGCCGAA
TTTACCATCG AAGGGGGTAT AGGCAAGCAA TTTATGGTCG ACAACCAGTG GTTGGTTCGT
CCCGGAATTA ATTATTGCGC CACATGGCAG ATTAGCGATG ACAGCCAAGA TGGTCCTGGA
ACCATTGCCG ATGAACGTAA GGAAGCCTAT GGCGTTGGTG CTGAGCTCAA CATGCTGTAT
TTACCTTGGT TGCTGCAGGG TAACTTGCGC TATGTGCATG AGTTTGGTGC CAAAAACACC
GCAGAAGGTT CTTCGTTCGT CTTTACCCTG ACCAAATCGT TTTAG
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| Protein sequence | MILFTVAVKS WTLNISKNIL TRRDKLKNYK RSLLCLAGIT GLVLNASAAV AATSGSHYPL
GGEGVAAGSP PPPGLHYRMY NTWYNADTLT DNNGDDVGLD FDLSAYAQIH RFVHITEKKI
WGANWGYNVL IPMVSKDISI DPIGVDDNTS FALGDVILEP LALFWYRERY DAILTLALIA
PTGDYDFSDA ASPGLGYWSG MLTAGGTYYL DTEKSWTISA LTRTLVHTEQ DDTHVRPGAE
FTIEGGIGKQ FMVDNQWLVR PGINYCATWQ ISDDSQDGPG TIADERKEAY GVGAELNMLY
LPWLLQGNLR YVHEFGAKNT AEGSSFVFTL TKSF
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