Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1721 |
Symbol | |
ID | 5610187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2066659 |
End bp | 2067627 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640932591 |
Product | cysteine synthase A |
Protein accession | YP_001473460 |
Protein GI | 157374860 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | [TIGR01136] cysteine synthases [TIGR01139] cysteine synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000132763 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAACA TTTTCGAAGA TAATTCTTAT ACCATTGGTA ACACCCCTCT TGTTCGTCTA AAGCGCGTTA GTAAAGGTAA TGTTTTAGCC AAAGTAGAAG CCAGAAATCC AAGTTTTAGC GTCAAGTGCC GTATCGGTGC CAATATGATT TGGGATGCTG AGAAAAAAGG CCTGCTTACT TCAGACAGAG AGATAATTGA GCCAACATCG GGTAATACCG GTATCGCTCT GGCTTATGTC GCTGCAGCCC GTGGTTACAA GCTAACACTC ACCATGCCAA ATACCATGAG CCTCGAGCGT CGTAAGCTTC TAAAAGCACT CGGCGCCAAT TTAGTGCTGA CCGAAGGTGC TAAGGGGATG AAAGGCGCTA TCGATAAGGC GGAAGAGATC CGTCAATCGG CACCAGAGAA GTATCTGCTT CTACAGCAGT TCGATAATCC GGCTAACCCC GAGATCCATG AGAAAACCAC TGGGCCAGAG ATTTGGAACG ATACCGACGG TGAAGTGGAT GTGGTTGTCG CAGGCGTTGG TACCGGTGGT ACTATCACAG GCGTTAGTCG TTACATAAAA AATACCCAAG GAAAGGCCAT CACTTCGGTT GCCGTTGAGC CAGCAGACTC GCCAGTTATC CAGCAGACAT TGTCTGGCCA AGCACTTCAA CCCGGTCCTC ACAAGATCCA GGGAATTGGT GCAGGATTTA TCCCGGGTAA CCTGGATCTC GAGATGATTG ATCGCGTAGA AGCCGTTACG AACGAAGAGT CTATCGAGAT GGCTCAACGT ATCATGAAAG AGGAAGGTAT TCTGGTTGGT ATCTCATCGG GTGCGGCCGT TGTAGCGGCA AATAGAATTG CTGAGCTACC TGAGTTTGAA GGAAAGAACA TCGTTGTTAT TCTTCCTTCA GCTGCTGAGC GTTACCTCTC TTCAGTGCTT TTCCAGGGTG AGTTCAGCGA CGCTGAGAAT ATCCAGTAG
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Protein sequence | MSNIFEDNSY TIGNTPLVRL KRVSKGNVLA KVEARNPSFS VKCRIGANMI WDAEKKGLLT SDREIIEPTS GNTGIALAYV AAARGYKLTL TMPNTMSLER RKLLKALGAN LVLTEGAKGM KGAIDKAEEI RQSAPEKYLL LQQFDNPANP EIHEKTTGPE IWNDTDGEVD VVVAGVGTGG TITGVSRYIK NTQGKAITSV AVEPADSPVI QQTLSGQALQ PGPHKIQGIG AGFIPGNLDL EMIDRVEAVT NEESIEMAQR IMKEEGILVG ISSGAAVVAA NRIAELPEFE GKNIVVILPS AAERYLSSVL FQGEFSDAEN IQ
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