| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1708 |
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| Symbol | |
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| ID | 5613712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2046645 |
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| End bp | 2048927 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932578 |
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| Product | formate C-acetyltransferase |
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| Protein accession | YP_001473447 |
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| Protein GI | 157374847 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1882] Pyruvate-formate lyase |
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| TIGRFAM ID | [TIGR01255] formate acetyltransferase 1
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0108007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA AAACTGAACA GTTTGCCAAC GCATGGGCAG GTTTCGCTTC TGGCGATTGG
AAAACTGAAG TCAACGTTCG TGACTTTATT CAAGCCAACT ACACTCCATA TGAGGGTGAT
GAAGCATTCC TGGCCGAAGC AACTCCAGCG ACCACCCAAC TTTGGGATAA AGTGATGGTT
GGGATCAAAC AGGAAAACAG CACTCACGCT CCTGTTGATT TCGATACTAA GAAAGTATCA
ACAATTACAT CACACGAAGC GGGTTACATC GAGCAAGAGC TTGAAACTAT CGTCGGCTTA
CAAACCGAAG CTCCACTAAA GCGTGCCATG CTTCCAAATG GCGGCATCCG TATGGTTGAA
GGTTCTTGTA AAGCCTACGG CCGTGAACTG GACTCAGATG TTAAGTACGT CTATTCAGAG
CTACGTAAGA CTCATAACCA AGGTGTATTC GATATCTACA CACCTGAAAT CATGCGTTGT
CGTAAGTCTG GTGTCTTAAC TGGTTTGCCT GATGCTTATG GCCGTGGTCG TATCATCGGT
GATTACCGTC GTATCGCCCT TTATGGTATC GATTACCTGA TGGCCGATAA GTTTGCTCAG
TTTGGCTCAC TTCAGGCTGG CTTCGAAGCC GGTGAAGACT TGTCTTCAAC TATGCAGCTT
CGTGAAGAGA TTGCAGAGCA ACATCGTGCA CTAGGTCAGA TGAAGCAGAT GGCAGCCAGC
TATGGTTTCG ACATCTCTAA GCCTGCAACT AACGCACAAG AAGCGATTCA GTGGACTTAC
TTCGGTTATT TAGCCGCAGT TAAGAGCCAA AATGGCGCAG CCATGTCTCT TGGTCGTACT
TCAAGTTTCC TCGATGTCTT CATCGAACGT GACCTTAAAA ATGGCACACT AACTGAAGAA
CAAGCTCAAG AGATGGTTGA CCATTTCGTG ATGAAGCTAC GTATGGTTCG TTTCCTACGT
ACTCCTGAAT ACGATGAGTT ATTCTCTGGT GATCCAATCT GGGCAACTGA ATCTATCGCC
GGTATGGGTG TTGACGGACG TACTCTGGTT ACTAAGTCGA GCTTCCGTTT CTTGCACACT
CTATACAACA TGGGTGCGAG TCCAGAGCCA AACATCACTG TATTGTGGTC AGAGAAGCTA
CCATTACCTT TCAAAAAGTA CTGTGCAAAG GTCTCTATCG ACACTAGCTC AATCCAGTAT
GAAAATGATG ATTTGATGCG TCCTGATTTC GCGTCAGATG ACTATGCAAT CGCATGTTGT
GTTAGCCCTA TGATTGTAGG TCAGCACATG CAGTTCTTCG GGGCTCGAGC TAACCTCGCA
AAAACGATGC TTTACGCCAT CAACGGCGGC TTGGATGAAA AACTTAAGAC TCAGATCGGT
CCTAAGTTCG ATGCCATCAC ATCTGAAGTT TTAGACTTTG ATGACGTTAT GGGTCGCCTC
GACACCATGA TGGATTGGTT AGCGACACAA TATGTGACTG CGCTTAACTC TATCCACTAC
ATGCACGACA AATACTCTTA TGAAGCAGCT CTAATGGCAC TTCATGACCG TGACGTTCGT
CGCACTATGG CGTGTGGTAT TGCCGGTCTT TCTATCGCTG CCGATTCACT TTCTGCAATC
AAGTTTGCGA AGGTTAAGCC AATCCGTGAT GAGCACGGCA TCGCTGTCGA TTTCGACATC
GAAGGTGACT ATCCTAAGTT TGGTAACAAC GACGCACGCG TCGATGACTT AGCTACTGAG
CTTGTAGAGC GCTTTATGGC TAAGATCCGT AGCATGAAGA TGTACCGTAA CGCGATCCCT
ACTCAGTCAA TTCTTACCAT CACTTCTAAC GTTGTGTACG GTAAGAAAAC AGGTACGACT
CCAGACGGTC GTCCAGCGGG CGCACCATTT GCTCCGGGCG CAAACCCTAT GCATGGTCGT
GACGAGAAAG GTGCGGTAGC TTCATTAACT TCTGTTGCTA AACTGCCATT TGCTCACGCT
CAGGATGGTA TCTCATATAC TTTCTCTATC GTACCAAATG CGTTAGGTAA AGATGAAGAC
GGACGTCGCG CTAACTTAGC AGCTCTGATG GACGGTTACT TCGCTCATAA TGACAGCCGC
GAAGGTGGTC AACACCTGAA CGTTAACGTT ATGAACCGTG AAATGCTTGA AGATGCAGTG
GTTAATCCAG ATAAATACCC ACAGCTTACC ATTCGAGTAT CAGGCTATGC AGTTCGCTTT
AATGCATTGA CTCCTGAGCA GCAGCAAGAC GTTATCACTC GTACCTTTAC TCAAGGTATG
TAA
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| Protein sequence | MTEKTEQFAN AWAGFASGDW KTEVNVRDFI QANYTPYEGD EAFLAEATPA TTQLWDKVMV
GIKQENSTHA PVDFDTKKVS TITSHEAGYI EQELETIVGL QTEAPLKRAM LPNGGIRMVE
GSCKAYGREL DSDVKYVYSE LRKTHNQGVF DIYTPEIMRC RKSGVLTGLP DAYGRGRIIG
DYRRIALYGI DYLMADKFAQ FGSLQAGFEA GEDLSSTMQL REEIAEQHRA LGQMKQMAAS
YGFDISKPAT NAQEAIQWTY FGYLAAVKSQ NGAAMSLGRT SSFLDVFIER DLKNGTLTEE
QAQEMVDHFV MKLRMVRFLR TPEYDELFSG DPIWATESIA GMGVDGRTLV TKSSFRFLHT
LYNMGASPEP NITVLWSEKL PLPFKKYCAK VSIDTSSIQY ENDDLMRPDF ASDDYAIACC
VSPMIVGQHM QFFGARANLA KTMLYAINGG LDEKLKTQIG PKFDAITSEV LDFDDVMGRL
DTMMDWLATQ YVTALNSIHY MHDKYSYEAA LMALHDRDVR RTMACGIAGL SIAADSLSAI
KFAKVKPIRD EHGIAVDFDI EGDYPKFGNN DARVDDLATE LVERFMAKIR SMKMYRNAIP
TQSILTITSN VVYGKKTGTT PDGRPAGAPF APGANPMHGR DEKGAVASLT SVAKLPFAHA
QDGISYTFSI VPNALGKDED GRRANLAALM DGYFAHNDSR EGGQHLNVNV MNREMLEDAV
VNPDKYPQLT IRVSGYAVRF NALTPEQQQD VITRTFTQGM
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