Gene Ssed_1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1703 
Symbol 
ID5609964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2040858 
End bp2041289 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content43% 
IMG OID640932573 
Producthypothetical protein 
Protein accessionYP_001473442 
Protein GI157374842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000496418 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.011388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAA TCGCCCTACT CTGCTTAACC TTTCTTTTCG GCTGTAGCCC TGACTCTTCA 
AATAGCGAGT CAAAACGAAC TCCGGAAGAT GTCTCTCTCG GTTTTTTTAA TGCTATCTAC
GTCGATCGTG ATGTCAACAA AGCACTTCAG TTTGTCGATG ACCCAATGAA GAAAGTGTTA
GCCCATTATC ATATTGCTGC ATCTGTTCAG CGCCATGTCC TTAACCTGTC CATGACTGAA
GTTCAGATGG AGATCGAAGA GATTGACATC GATTTTTTCA GAAAGTTTAC TGATGACGTC
ACCGTTATCG TCAAGATGCA AGGTTTGAAG GGAGGAGAGC CTTGGATAGA CGATAGAACC
ATCAGACTCC ACAAGAAAGG CACTAAGTGG GAGATTATCG AGATCTTGCC TGAAAAAGGT
AACCTACATT AA
 
Protein sequence
MRIIALLCLT FLFGCSPDSS NSESKRTPED VSLGFFNAIY VDRDVNKALQ FVDDPMKKVL 
AHYHIAASVQ RHVLNLSMTE VQMEIEEIDI DFFRKFTDDV TVIVKMQGLK GGEPWIDDRT
IRLHKKGTKW EIIEILPEKG NLH