Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1703 |
Symbol | |
ID | 5609964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2040858 |
End bp | 2041289 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640932573 |
Product | hypothetical protein |
Protein accession | YP_001473442 |
Protein GI | 157374842 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000496418 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.011388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATAA TCGCCCTACT CTGCTTAACC TTTCTTTTCG GCTGTAGCCC TGACTCTTCA AATAGCGAGT CAAAACGAAC TCCGGAAGAT GTCTCTCTCG GTTTTTTTAA TGCTATCTAC GTCGATCGTG ATGTCAACAA AGCACTTCAG TTTGTCGATG ACCCAATGAA GAAAGTGTTA GCCCATTATC ATATTGCTGC ATCTGTTCAG CGCCATGTCC TTAACCTGTC CATGACTGAA GTTCAGATGG AGATCGAAGA GATTGACATC GATTTTTTCA GAAAGTTTAC TGATGACGTC ACCGTTATCG TCAAGATGCA AGGTTTGAAG GGAGGAGAGC CTTGGATAGA CGATAGAACC ATCAGACTCC ACAAGAAAGG CACTAAGTGG GAGATTATCG AGATCTTGCC TGAAAAAGGT AACCTACATT AA
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Protein sequence | MRIIALLCLT FLFGCSPDSS NSESKRTPED VSLGFFNAIY VDRDVNKALQ FVDDPMKKVL AHYHIAASVQ RHVLNLSMTE VQMEIEEIDI DFFRKFTDDV TVIVKMQGLK GGEPWIDDRT IRLHKKGTKW EIIEILPEKG NLH
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