| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1701 |
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| Symbol | |
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| ID | 5609962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2038999 |
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| End bp | 2039907 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932571 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473440 |
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| Protein GI | 157374840 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000328328 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.027964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTAT TTTTTGATGA AGTGAGTAAA GTGGCGTTTG GCGAAGAGGC CAATCGTCTT
TTCCATGGCC GTGGCGGGCT CTACACCGGA GCCGAACATT TGTGCCTAGA CTGGTTCCCC
CCCGTATTAC TGCTGACCAG TTTCAAGCCT CTGGAAGCCG ATGAGTTAGC ATTGTCGGTA
GATACCATCA AGCAACGTTG GCAGGCACTC AGAGGTGAAG AGGCGCTTAA CCTTGTCTAT
CAATATCGAA GCGGTGGGCA GACTCATACT GAGCTTGTGG CAGGTAGCGT ACCCGAGAAG
CATAAGGTTA AAGAAAACGG TGCTGAATTT TATATCCACC TGTTGAGAGG CCAAAATCAT
GGCCTGTTTC TCGATATGAA AAATGGTCGA CAGTGGGTGA GGGAGCATTC GCAGAATAAG
AAGGTGCTTA ATCTCTTCTC CTATACTTGT GGATTTTCTG TTGCTGCGTT GCAAGGCGGT
GCCGACAGCG TCGTTAATAT CGATATGAGC AAGGGGGCTC TGTCGATAGG AAAGCAGAAC
CATCTATTAA ACGATTTTCC GGCGGGCGCT CGCTTTTTTG GCCATGATAT TTTTAAGTCA
TGGGGCAAGC TGACTAAACT CGGACCCTAC GAGATGATTA TTGCCGATCC ACCGAGTAAT
CAAAAGGGCA GCTTTGTTGC GACCAAAGAT TACTCTCGAC TACTGAAGCG TGCACCTGAG
TTATTGACCT CCGACGGGGA GATACTCTTA TGCCTTAATG CTCCCGAGTT AAGCATCGAG
TATCTGAAGC TGCAAGTGGA AGAGTTCAGC CCCACATTAG TGTTCGTAGA GCAGCTGGAA
AACCCTGCCA TATTTGCAGA CATCGACAGG AATAAGGCGC TCAAAGTCCT TAGGTATAAG
TTAGCTTAA
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| Protein sequence | MQLFFDEVSK VAFGEEANRL FHGRGGLYTG AEHLCLDWFP PVLLLTSFKP LEADELALSV
DTIKQRWQAL RGEEALNLVY QYRSGGQTHT ELVAGSVPEK HKVKENGAEF YIHLLRGQNH
GLFLDMKNGR QWVREHSQNK KVLNLFSYTC GFSVAALQGG ADSVVNIDMS KGALSIGKQN
HLLNDFPAGA RFFGHDIFKS WGKLTKLGPY EMIIADPPSN QKGSFVATKD YSRLLKRAPE
LLTSDGEILL CLNAPELSIE YLKLQVEEFS PTLVFVEQLE NPAIFADIDR NKALKVLRYK
LA
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