| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1699 |
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| Symbol | |
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| ID | 5609875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2036708 |
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| End bp | 2037631 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932569 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473438 |
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| Protein GI | 157374838 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
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| TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.30806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.296517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTT TAATTACCGG AGCAAGTGGT TTTATCGGCC ATCAACTCGT CAGAGCATTA
GAAAGTAAGC ACCAGCTAAG CCTGCTTTCA AGGCACCCGG CCCGGGCCAG AGAGAAGTTA
GGTAGCCAAC ATCAATATCT GGCATCCCTC GATAGTTTAT CTTCTCTGGA TGAGTTTGAT
GCTGTGATTA ATTTAGCCGG TGAACCCATA GCGGGTAAAC GGTGGAGCAT TGAACAAAAA
CAGCTGATCT GTGATAGTCG ATGGAATATC ACCGCTCGTT TATCTGAGCT TATAGCCCGG
AGTCAAACCC CGCCTTGGGT CTTCATCAGC GCCTCTGCTA TCGGACGTTA CGGCCAACAG
GGCCCAATTC CCATCGATGA GAGCTATTTT GACGATCCCA AATCATCCCA GAGCAATGAT
CTTGAATTTA CTCAAACCGT TTGCCGGAAA TGGGAGAGTT CAGCCTTAAA CGCACAATCC
GATAATACGC GGGTCTGCAT TGTCGCAATA GGTTTAGTGC TTGGTTTAAA TGGAGGAGCG
CTGCCAAAGA TGTTACCGGC ATTTAAGCTG GGCTTAGGCG GCCCTATCGC CTCAGGCGAG
CAAGGGATGA GTTGGATCCA CCAGCAAGAC CTTATCTCGC TATTTATCTA TCTGCTGGAG
CATGGTGAAT GTAGTGGCGT CTATAACGCC ACCTCCCCCA ACCCGGTTAG CAACAAGGAT
TTCTCGACCA GCCTGGGGGC AGCCTTATCC CGACCGGCAA TAATTCCTAT GCCATCCTTT
GTGCTCAATC TCGCACTGGG CGAGATGGCA GAGTTACTGA CTCAGGGCCA GTATGTTATT
CCTAAACGCG CTCTGGATGA TGGCTTCACC TTTAAATACG CAAGATTAAC CGATGCTTTT
ACCCAGATAT TCGCCGGTAA ATAA
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| Protein sequence | MNILITGASG FIGHQLVRAL ESKHQLSLLS RHPARAREKL GSQHQYLASL DSLSSLDEFD
AVINLAGEPI AGKRWSIEQK QLICDSRWNI TARLSELIAR SQTPPWVFIS ASAIGRYGQQ
GPIPIDESYF DDPKSSQSND LEFTQTVCRK WESSALNAQS DNTRVCIVAI GLVLGLNGGA
LPKMLPAFKL GLGGPIASGE QGMSWIHQQD LISLFIYLLE HGECSGVYNA TSPNPVSNKD
FSTSLGAALS RPAIIPMPSF VLNLALGEMA ELLTQGQYVI PKRALDDGFT FKYARLTDAF
TQIFAGK
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