| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1693 |
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| Symbol | |
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| ID | 5609630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2027549 |
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| End bp | 2030035 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640932563 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473432 |
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| Protein GI | 157374832 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03502] extracellular lipase, Pla-1/cef family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000331771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC TCCTTTTGGG TGTTGCTATT GCATCTGCGC TTGGGCTTAC AGGATGTAGT
GAAGATAGTG TCGACGAACT CACGGATAAG GTTGAGCCTC TGATCCCTGA GTCTCATATT
TTATTTAATC CTGATCCTGC TGTTGGTGAC GTTCCCTTGC CAAACGATCT CCTCTTTAGT
GGCACACTCG ATGGCACCAT TAACATTCCG GGTGAACAAG CCGATGGGTC GAGTGATTAT
ACCGATCCCT CTATGGCGCT TGGCGCACTC GATGGCTGGT CTACCACGGC GCCTATCTCA
ATTAACGTCG ACCCGGCAAC CGATCATGAC GGCACTGTCC TATCCTTAGA TGTTGCCTCG
GTATTCCAAC CCGGTGCGGT AAGAGTGTTT GAGGCTACTG TCGGTGGCCC GCTATCGATG
GATCCTGAGT GTAAAACCGC TCCTTCGGTA TCCGCATGTA AAGTCGGTGC AGAACTTCAA
TTCGGCGTCG ATTTTGTCTC TAAGGGCTCT GGAAATACGA TTGCGATAGT GCCGCTTAAG
CCACTCAAAT CTAATCAGTC ATATATCTAT GCGACGACCG ATCTGATACA AGACTCCGAA
GGTCGTAGCA TCGCGCCATC GGGCACATAT TTACTACTTA AGTTAGATAT CGAGACTAAA
CCCCTCGAAA CACCCGATCA GCTAATGTTA CAAACATTAG TGAACAGCTA CGAGAAGGGA
ATGTCGGCCG CTCACGGTGT GGATTCTGTG ACGATCAGTT ACTCTGGCCT GTTTACCACT
CAGTCGGTTG CTGATGTCTA TGAGACCTCA AAATTACTTA TGGTCGATCC GACACCGGGT
AATCCGTTTG CCCCCTCTAT TACCGTTCCG GTTCAGCATC CTCTGGGGAT CACAGTGGCT
CAAGCCGCCG GTTTGACTCC CGCCGATGGC GCCGCCTATG TAGTATCGAG TTTAGCCGAT
GTCTATACCG CCCAGGCGAC CTTGCCTACT TACGGTACGT GTAATTCTGT TATGTGCTCC
GGCATAAGCG GTTACTGGAA AGCCCTTGGC GATAGTCCTG TTTCTGTATT GCTCGCACTT
GAGTCGGGTA CCATGAGTCA ACAGACCTAT GGCGCTCAAG CGATGGCTTA CGGAATAGAC
CCGGCGGAAG GTATCGCTAA TCCGGCGCTT CTGGCCGGTA AGACCTGGTT ACTCGATGAC
GGTACCGCGG CTGATAAGGC TAAACACCTC ACTAAGTTTA ACCCTATCCC ACAGCCTACC
GGCAGTGAGA CTGTACCTGT TTTGATCTCT ATTCCTAATG CCGAGCGCCT TGCAGATTTC
TATGCCGCTC AAGGTTTGCC ATTTACGCCT CCCGTCGCGG GCTGGCCAAC AAACCTTGCC
ATGCATGGAC TAGGTAGTGG TAAAGAAACG GCTTTAGCCT ACGCGGGAAC TTATGCTGCA
ATGGGGGTTG CGACAATCGC AATCGATATG CCTCTGCATG GCGCACGTTC ATTCGATGCT
AACGGTGACG GAGTATATGA GGTTTCTGCA TCGGATCCCT CTTATGGCGC CGTGATAGGT
AACCCTGATG CGTTTAAGTA TGGAAACCCG TTAGTCTTTA TCAATATCGA GAGCACCTTG
AGTGTGCGTG ATAATTTCCG TCAGGCAACT CTTGATCATC TGGCCTTGAG AGCGTCATTA
ACCGGTCTTG CTGGTGGGCT CGCTCAGGCT CAGATGCCTC AGATATTTGA CATCACTAAA
ATGAGCGCAC AGGGCTTGAG CCTCGCCGGT ATCGTAGGTA CTAATTTTGC TACTTACGCC
AGTTCCGGTC TGACTCACCC GGATTCCGGT GCCGATCTGA GCTATGTCTA CAAGCTTAAT
GCAGTATCGC TTGTGGCACC GACAGGCGGA TTTGCCGGCA CCTTTATCGG CTCCGCAACC
TTCGGTCCTA TGCTGTTTGA AAGTGTGACG GCCAGTGATA CGTTCCAGGC ATTAGTCGAA
GAGGCAAATA CAGAAGGATA TGAGCCAGGT ACACCTGAGT ACGCCGCGCT TGTGCAGGCG
GTTTATGCCG AGTTTTTACC GACCTTTGCC TTCGCCGTAC AGACGGCTGT CGACAGTGCG
GATCCGATTA ACCATGCAGC CGTGTTGAAA GCGACCGAGT TGCCTATCCA CTTAATCGAA
GTGGTGGGTG ATGGCGATCA GAACCTGCCG GACCAGGTAT TGCCAAATAG CGTCGAAGGT
TTCCCGACTG CGGGTACCGA GCCCTTGATT GCTAACCTTG GTCTTGAGTG TATCGATACG
ACAACCGCGG GTTCGGGAGC CGTTCGTTTC ACTAAGGGTC ATCACAGCTC GATTATCAGC
CCCGAAGGAC CTGAAGGTTC GGCGGCCGCA ACAGTTGAGA TGCAACAACA GGTAGCCACG
TTTGCCTCAA CAGCTGGCAT GGGAGATGCG ACCATATTGG TTCAAGATAA AGATGTGATT
CAGCCCTGCG CCGTTCCGGC CGGCTAA
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| Protein sequence | MKRLLLGVAI ASALGLTGCS EDSVDELTDK VEPLIPESHI LFNPDPAVGD VPLPNDLLFS
GTLDGTINIP GEQADGSSDY TDPSMALGAL DGWSTTAPIS INVDPATDHD GTVLSLDVAS
VFQPGAVRVF EATVGGPLSM DPECKTAPSV SACKVGAELQ FGVDFVSKGS GNTIAIVPLK
PLKSNQSYIY ATTDLIQDSE GRSIAPSGTY LLLKLDIETK PLETPDQLML QTLVNSYEKG
MSAAHGVDSV TISYSGLFTT QSVADVYETS KLLMVDPTPG NPFAPSITVP VQHPLGITVA
QAAGLTPADG AAYVVSSLAD VYTAQATLPT YGTCNSVMCS GISGYWKALG DSPVSVLLAL
ESGTMSQQTY GAQAMAYGID PAEGIANPAL LAGKTWLLDD GTAADKAKHL TKFNPIPQPT
GSETVPVLIS IPNAERLADF YAAQGLPFTP PVAGWPTNLA MHGLGSGKET ALAYAGTYAA
MGVATIAIDM PLHGARSFDA NGDGVYEVSA SDPSYGAVIG NPDAFKYGNP LVFINIESTL
SVRDNFRQAT LDHLALRASL TGLAGGLAQA QMPQIFDITK MSAQGLSLAG IVGTNFATYA
SSGLTHPDSG ADLSYVYKLN AVSLVAPTGG FAGTFIGSAT FGPMLFESVT ASDTFQALVE
EANTEGYEPG TPEYAALVQA VYAEFLPTFA FAVQTAVDSA DPINHAAVLK ATELPIHLIE
VVGDGDQNLP DQVLPNSVEG FPTAGTEPLI ANLGLECIDT TTAGSGAVRF TKGHHSSIIS
PEGPEGSAAA TVEMQQQVAT FASTAGMGDA TILVQDKDVI QPCAVPAG
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