| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1683 |
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| Symbol | |
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| ID | 5609926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2017013 |
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| End bp | 2018446 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640932553 |
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| Product | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase |
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| Protein accession | YP_001473422 |
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| Protein GI | 157374822 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase
[COG0135] Phosphoribosylanthranilate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGTT CATCCACACC AAAAGAGAGT AACGTGTTAA CCAAAATAGT CGATACCAAA
GCGGCGCACA TGGAAGCACT GAAATTACGT TTTCCGGAAG CGATGCTCGA GCCTAAGATC
TCCGACCGCA GTCTTTATGA AGCTCTCAAA GCCCCCAATG CCGGGTTTAT TTTCGAGTGT
AAGAAGGCCA GCCCTTCTAA GGGACTCATT CGTGAACAGT TCGACGTCGA AGCGATAGCG
GATGTCTACA ACGAATATGC CGCCGGGATC TCGGTCCTTA CCGATGAGCA ATTTTTTCAG
GGTGATATGG ATTATATCCC TAAGGTACGC GCCCGGGTTA AACAGCCTAT CTTGTGTAAA
GACTTCTTCA TCGATACCTA TCAGGTTAAG CTCGCCGCTC ATCAGGGCGC CGATGCCATC
TTGTTGATGC TCTCAGTACT CGATGACGAG CAATATCGCT TATTGGCCAA TGAAGCCGAA
AAATACCAGC TCGATATGCT CACCGAGGTG AGTAACGAGC AGGAGCTTGA ACGCGCCATC
GCACTGAATG CGGCGATAAT CGGCATTAAC AACAGAAATT TGCGCGACCT TTCAACAGAC
TTGTCTACAA CCGAAGCACT GGCGCCCCAC ATCCCTGCCG ACAGAGTCGT CATTAGCGAG
TCTGGCATAT ACAACCAGGC ACAGGTACGC CGTTTAAGTC CTCTGGTCGA TGGTTTCTTA
GTGGGCAGCT CCTTAATGGC CGAAGACGAT CTGGATCTTG CCTGCCGCAC CCTCACCCTG
GGCCATAATA AAGTGTGTGG TCTGACGCGT AGCGAAGATA TTCAAGCCGT TGCAAACTCG
GGGGCTGTCT ATGGCGGTTT AATCTTTTAC CCTAAATCTC CCCGTAGCAT TAGCCTTGAG
CGCGCCACCG AGCTCCTCGA GCACCACAGA GCCACCGGGC CCGGGCTTAA TTTCGTTGGT
GTCTTCGTTA ATGAAGAGCC ACAAATCATC GCCAAGACCG CAAGCCAGCT CAATCTCTTT
GCCGTACAAC TCCATGGCAA GGAATCTGAG TATGAAATTG ATCAGGTCAG GGCAGCCCTG
AATACCATGA ACTGTAATGC ACAGCTCTGG AAGGCTGTCG CCGTCAATGC CGATGTTGAG
AGCCAGAGTG AAATCACGGT GCCAGCGAAC GTGGACCGGG TGTTGTTCGA TAGTAAGAGC
AGCAGATCCG GTACATCTCA GTTTGGCGGC ACCGGCCTGA CCTTCAACTG GCAGCAGGCA
CTACCGAATA AGCAAGCGGC CATGTTGGCC GGAGGTTTGA CTGCGGAGCT TGCCCTGGAG
GCGAGCCAAC AAGGCTTTTA TGGACTGGAC TTTAACTCAG GCCTTGAAAG CGCACCGGGC
ATTAAAGATC ACGAAAAAAT AGCGACAGCG TTTAGTGCTC TGAGACAGTA TTAA
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| Protein sequence | MSSSSTPKES NVLTKIVDTK AAHMEALKLR FPEAMLEPKI SDRSLYEALK APNAGFIFEC
KKASPSKGLI REQFDVEAIA DVYNEYAAGI SVLTDEQFFQ GDMDYIPKVR ARVKQPILCK
DFFIDTYQVK LAAHQGADAI LLMLSVLDDE QYRLLANEAE KYQLDMLTEV SNEQELERAI
ALNAAIIGIN NRNLRDLSTD LSTTEALAPH IPADRVVISE SGIYNQAQVR RLSPLVDGFL
VGSSLMAEDD LDLACRTLTL GHNKVCGLTR SEDIQAVANS GAVYGGLIFY PKSPRSISLE
RATELLEHHR ATGPGLNFVG VFVNEEPQII AKTASQLNLF AVQLHGKESE YEIDQVRAAL
NTMNCNAQLW KAVAVNADVE SQSEITVPAN VDRVLFDSKS SRSGTSQFGG TGLTFNWQQA
LPNKQAAMLA GGLTAELALE ASQQGFYGLD FNSGLESAPG IKDHEKIATA FSALRQY
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