| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1640 |
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| Symbol | |
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| ID | 5611038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1960677 |
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| End bp | 1961801 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932510 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473379 |
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| Protein GI | 157374779 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3199] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.538817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGTC GGTTTCGTTT AGGTTTGATT ATTAACCCTT TAGCGGGTCT GGGGGGGAGC
GTTGCGCTTA AAGGCAGTGA CGGAGTTGCC ATGGAGGCGA TAGCTAAGGG AGCCAAGCCT
AAGGCTCACC TGCGCATGCA GCAGGCCCTC GAGGTGATCT TACCGTACCG GGATGAGGTT
GAAATTATCA CGGCCTCCGG CCCTATGGGC GAAGCCTTAG CATTGCAGAT GGGCTTTCAT
GTTCGAGTCG TGCATGAGGT GGGTGATGAA ACGCAGGCTG AAGATACCCA GGCCGTGGTT
AAAGTCCTAC TCAATGAAAC ATTAGATCTC TTACTGTTTG CCGGTGGCGA TGGGACGGCG
CGCGATATCT TTGCTGTAGC CCATGACGAC ATGCCTGTGC TTGGTGTACC TGCCGGAGTC
AAAATACATT CGGGGGTATA TGGCATCACT CCTCATGCGT CGGGCATGGT GGTCAAGATG
TTGCTCGATG GCGAGCTTGT GAGTCTGATG GATGCCGATG TGATGGATAT TGATGAGGTC
GCTTTTCGGG AAGGGGTGGT TAAGGCGCGC CGCTTTGGTG AGATGTTAGT GCCTGCCGAG
CCCAGATATA TACAGGCCGT TAAGATGGGC GGAATAGAGA GCGATGAGCT GGTGCTCGCC
GATATCGCTG CCGAAGTGAT TGAGAGCATG GATGAGGAGC TTTTCATCAT GGGCTCGGGC
AGTACGGTCG CAGCGGTGAT GGCCGAGCTT AATCTTGATA ACACCTTACT GGGTGTCGAT
CTTATTAAAT CTAATCAGCT TCTGGGATCA GATTTGACGA CTGTGCAGCT CATAGAAATG
ACGGATGAGT TACCGACTAA GTTAGTGATA ACCCTTATCG GTGGGCAGGG GCATATTCTG
GGGAGAGGCA ATCAACAGCT GTCACCACAA CTGGTCAGGC GGATTGGAAA AGAGAATATT
ATTATTCTGG CGACAAAAAC TAAGTTAAAA GCACTTGAAG GCAGGCCGTT AATTGTGGAT
AGTGGCGACC CTGAATTGGA TCGCGAACTA TGTGGCTACT ACCGGTTGAT CACTGGCTAT
CATGATTATG TGATGTATCA GGTCGCAAAT CCGGATTTAG ATTGA
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| Protein sequence | MTSRFRLGLI INPLAGLGGS VALKGSDGVA MEAIAKGAKP KAHLRMQQAL EVILPYRDEV
EIITASGPMG EALALQMGFH VRVVHEVGDE TQAEDTQAVV KVLLNETLDL LLFAGGDGTA
RDIFAVAHDD MPVLGVPAGV KIHSGVYGIT PHASGMVVKM LLDGELVSLM DADVMDIDEV
AFREGVVKAR RFGEMLVPAE PRYIQAVKMG GIESDELVLA DIAAEVIESM DEELFIMGSG
STVAAVMAEL NLDNTLLGVD LIKSNQLLGS DLTTVQLIEM TDELPTKLVI TLIGGQGHIL
GRGNQQLSPQ LVRRIGKENI IILATKTKLK ALEGRPLIVD SGDPELDREL CGYYRLITGY
HDYVMYQVAN PDLD
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