| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1639 |
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| Symbol | |
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| ID | 5611037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1959434 |
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| End bp | 1960591 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932509 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001473378 |
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| Protein GI | 157374778 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAT CCGCTAACGT TAGCACGCAG TTGCGTTGGA TCAGCGCCTG CTATTTCTTC
TTCTTTGCCA TTCTCGGCGT GATGGTGCCT TATCTGGGTG TCTTCTTTGA GAACCGCGGT
TTTAATCCTC AGGAGATAGG CTTCTTGCTG GCCATTTTGA TGGCCACTCG CATCATTGCA
CCGAATGTTT GGGCCATGGT GGCGGATAAA ACGGGCATGC GTTCTCAGCT GGTTAAGTGG
GGGGCCGCAG CTGCTGCCGT CAGCTATTTA AGTTTTTTTC ATGATGGCAG TTTCACCTAT
TTAGCCATCA GCCTCAGCAT TTACACTTTT TTCTGGAATG CCATTTTAGC CCAGCTTGAG
GTGATAACGC TGGAAACCTT AGGCGAAAAT ACCTCACGTT ACGGCTCCAT TCGCAGCTTC
GGCAGTTTAG GTTATCTGGT GTTTGTTGTG AGTGTCGGTT TTGCAATCAG TCTGTGGGGG
ACCGAGATTT TACCCTACAT CGGCATGCTG CTATTTGTCG GCTTACTGAT CAGTGCTTTA
CCTCTGCCGT CAGACAGGGT GGTGGTCAAA CATCAAGCCG AAAAGCCAAA ACTGAAAATT
GATCGGGCCA TATTCTGGTT TCTTGTCTCG GCTATCTTGT TACAGATGAG TGCCGGGCCG
TTTTATGGTT TTTTCGTACT CTATCTGAAG CAGTCCGGTT ACAGCGAGGC CATCGCGGGG
ATCTATGTTG CATTCGGTGT GTTAGCAGAA ATTCTTATGT TTATGCTGGC GCCCAGACTA
CTGGGTCGCT TCGGGGTAAA CAGATTATTG ATCATCAGCC TGGGCTTCAC GGGTCTGCGG
TGGTTATTGA TGGCATTTTG TGTCGATAAT TTTCTGTTGC TGGGTGTGAG TCAGCTCCTG
CACGCGTTTA CGTTTGGCTT AGTGCATGCC GCCTCCATTC AATTTGTGCA TGGCTACTTC
GATATCAGCC ATCGCAGTAA AGGTCAGGCT CTGTATGCCA GTTTAAGCTT TGGTGTCGGT
GGAGCAATGG GTACCTGGCT CTGTGGTATG ATCTGGGGCG ATGGAAGTGG GGCTTCACTG
GCGTGGGTTG CTGCGGCAGC CTGTGCATTT CTGGCTATGC TGGCTATCTT TTTTATCCCT
AAAAAGGTTA AGCATTAA
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| Protein sequence | MNQSANVSTQ LRWISACYFF FFAILGVMVP YLGVFFENRG FNPQEIGFLL AILMATRIIA
PNVWAMVADK TGMRSQLVKW GAAAAAVSYL SFFHDGSFTY LAISLSIYTF FWNAILAQLE
VITLETLGEN TSRYGSIRSF GSLGYLVFVV SVGFAISLWG TEILPYIGML LFVGLLISAL
PLPSDRVVVK HQAEKPKLKI DRAIFWFLVS AILLQMSAGP FYGFFVLYLK QSGYSEAIAG
IYVAFGVLAE ILMFMLAPRL LGRFGVNRLL IISLGFTGLR WLLMAFCVDN FLLLGVSQLL
HAFTFGLVHA ASIQFVHGYF DISHRSKGQA LYASLSFGVG GAMGTWLCGM IWGDGSGASL
AWVAAAACAF LAMLAIFFIP KKVKH
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