| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1625 |
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| Symbol | |
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| ID | 5611387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1939927 |
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| End bp | 1940442 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932495 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473364 |
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| Protein GI | 157374764 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00100987 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGCAA CAACAAATCC CGCCTTGGCG TCTCTGAAAG ATATTCAGAC ACCAGACGTC
ATTGCCTCAT GGCCTATCGC TTATGGCTAC TGGGTCACAC TGGCTCTGAT AATAGTGACG
ATTACTGCCA TTTTCTATCT GGTCAAACGC CGACGCCTAT ACTCTGCACC TAAGCGTATC
GTGATAGTCG AACTCAATGA GCTGGATCCA AACCACAAAG AGTTATCTTC ACAAGTTAAT
ACCTTGATTA AACGGGCTGC TATGAGCTAC CTGCCCCGTG AACGAATCGC AGGACTCGAG
GGACAGACTT GGTATAGTTG GATGAATACT CAAGTTAAAC AGCCTGATCC ACAACTGCAG
CAGCTGCTCG ACAAACGCTA TCAAAGAGAG GGTTTAGCCA GTGGAGAAGG CCCGGTTCTG
AAGGCCTTAG CTCACCAATG GCTTAAAGAA GCGTTACCCA TCAAGGTGGA CTCAGCAAAT
AGCTCCCAAA CAAATACCGA GGAGCACAAA TGCTGA
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| Protein sequence | MEATTNPALA SLKDIQTPDV IASWPIAYGY WVTLALIIVT ITAIFYLVKR RRLYSAPKRI
VIVELNELDP NHKELSSQVN TLIKRAAMSY LPRERIAGLE GQTWYSWMNT QVKQPDPQLQ
QLLDKRYQRE GLASGEGPVL KALAHQWLKE ALPIKVDSAN SSQTNTEEHK C
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