| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1624 |
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| Symbol | |
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| ID | 5611386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1938941 |
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| End bp | 1939933 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640932494 |
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| Product | von Willebrand factor, type A |
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| Protein accession | YP_001473363 |
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| Protein GI | 157374763 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000050495 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGACTC TCGCATGGGC ATGGCTTTTA CTACTTCTGC CACTACCGCT TATTTTTCGT
AAAAAACAAC AAGAGGTGGA GGTCAGCGGA CACCTGCATC TGCCAGGTAT TGCACAAAAT
GGCCCCCAAC AGATAGAGCA ACAAGCCAGA TCGCGTAAAA TGCATTGGCT TATTTGGATA
TTGTTAATCA TCGCCGTCGC TCGTCCATTA TGGATGGGGG ACCCCATAGA GCTTCCCAGT
AAAGGGCGCG ACTTGATGAT GGCGGTCGAT CTCTCCGGCA GTATGCAGAT TGAAGACATG
GTACTCGATG GAAAAACGGT GGATCGTTTC ACTATGATCC AAGCCGTTGT CAGCGACTTT
ATTGAACGAC GTAAGGGTGA CAAATTAGGC TTAATTCTTT TTGCCGATCA CGCCTACCTG
CAAGCGCCTC TCACTCAGGA CCGACGCTCC GTGGCCCAAT TTTTAAAAGA GGCGCAAATA
GGGCTGGTCG GGAAGCAGAC CGCCATAGGT GAGGCTATTG CCTTAGCGGT TAAACGATTC
GATAGGGTCG ATGAGAGTAA CCGCATATTA GTATTACTTA CCGATGGTTC AAACAACTCC
GGCTCCATCT CGCCGGAGCA GGCGGCGGCC ATTGCGGCCA AGAGAGGCGT CAAAATTTAC
TCCATCGGTG TCGGTGCTGA AGTGATGGAG AGACGCACCC TATTTGGCAA GGAGCGAGTT
AATCCCTCGA TGGATCTCGA CGAAACCCAG CTCACCGCAC TGGCACAAAC CACTGGCGGT
CTCTATTTTC GAGCTCGAAA TGCACAAGAG CTGGAGTCAA TCTATCAAGA GATAGATAAG
CTTGAACCTA TCAGTCGGGA TCAACTCAGT TACCGACCTC AATCGGAGCT TTTTTACCTC
CCTCTTGCTA CGGCCCTGCT AGTCAGTTTT TTTATGGCCT TATCGCAACT CTCACTCTTT
AAACGACTCA GCATCAGATG GGGTAAACGC TAA
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| Protein sequence | MLTLAWAWLL LLLPLPLIFR KKQQEVEVSG HLHLPGIAQN GPQQIEQQAR SRKMHWLIWI
LLIIAVARPL WMGDPIELPS KGRDLMMAVD LSGSMQIEDM VLDGKTVDRF TMIQAVVSDF
IERRKGDKLG LILFADHAYL QAPLTQDRRS VAQFLKEAQI GLVGKQTAIG EAIALAVKRF
DRVDESNRIL VLLTDGSNNS GSISPEQAAA IAAKRGVKIY SIGVGAEVME RRTLFGKERV
NPSMDLDETQ LTALAQTTGG LYFRARNAQE LESIYQEIDK LEPISRDQLS YRPQSELFYL
PLATALLVSF FMALSQLSLF KRLSIRWGKR
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