| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1616 |
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| Symbol | |
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| ID | 5613740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1929311 |
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| End bp | 1930027 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932486 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473355 |
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| Protein GI | 157374755 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2859] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000200247 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000163604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAAAAAA ATTCTCAGGT CTCGGCTTTT ATATTAGGTG GATTTCTCTG CCTGGGTCTC
ATTCTCCTTG GTAATAGCAT AGGACAGAGT CTGATCCAGA TGAAATCCAT GGAGCGTACC
GTCACCGTAA AGGGGCTGGC AGAGCAGGAA GTTAAAGCCA ATATCGCCAT CTGGCCGATA
CGCTTTACCG AAGTCGATAA CGATCTCAAC TCTCTCTATC AGACAGTGCA AGATAAGACA
GATAAAGTGG TACTTTTCCT GACCAAGCAA GGTTTTACAC CCGATGAAAT TTCAACTTCC
CTCCCCTCTA TCGAAGACAG ACAGGCTCAG GGCTATGTCG ACCCTAATGT AAAATTTCGC
TACGCCGCCA AGGTCACAAT ATCTCTCTAC ACTAAGCGAG TGGATCTGTT CTTGACCAGC
CGTAAGCATC TGCTGGATTT GGCCAAAGAT GGAATTGCCA TATCAAATCA AGATTACAAC
AGCCGGACCG AATTTCTGTT TACAGAACTC AACCGGGTGA AACCAGAGAT GGTACAAGCC
GCCACTCAAA ATGCCCGCAA AGTGGCTGAC AAGTTTGCCA AAGATTCCAA TTCAACATTA
GGCAAAATTA AGAAGGCTTC ACAAGGTCAA TTTAGTATCT CAGATCGAGA CAGCAATACC
CCTCACATAA AGAAAGTACG TGTAGTCTCG ACATTAACCT ACTATTTAGG TGACTGA
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| Protein sequence | MQKNSQVSAF ILGGFLCLGL ILLGNSIGQS LIQMKSMERT VTVKGLAEQE VKANIAIWPI
RFTEVDNDLN SLYQTVQDKT DKVVLFLTKQ GFTPDEISTS LPSIEDRQAQ GYVDPNVKFR
YAAKVTISLY TKRVDLFLTS RKHLLDLAKD GIAISNQDYN SRTEFLFTEL NRVKPEMVQA
ATQNARKVAD KFAKDSNSTL GKIKKASQGQ FSISDRDSNT PHIKKVRVVS TLTYYLGD
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