| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1606 |
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| Symbol | |
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| ID | 5611661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1916292 |
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| End bp | 1917269 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640932476 |
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| Product | putative adh_zinc, zinc-binding dehydrogenase |
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| Protein accession | YP_001473345 |
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| Protein GI | 157374745 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.265737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAA TGATAATTAA ACAACTGGGT TCGAGTGACG TCTTCGAGCT TGCAGATAAA
GTGACACCTA TTGTGAAATC CGGGCATATG CTGGTGGAAG TAAAAGCCAG CAGTGTCAAT
CCATTAGATA CCATGCTGCG TTCGAGCGAC ACCCCCTGGT CTGCCAATTT ACCTGAGGTT
TTACATGGGG ATGTGGCAGG CATAGTGACT GAGGTTGCTG GAGATGTGGG CCATTTCAAG
GTCGGCGATG AGGTTTATGG CTGCGCCGGT GGGATCGCGG GTATTGATGG TGCGCTGGCC
GAGTTTATGT TGGTCGATGT GGACTTGATG GCACATAAAC CGAAAAGCCT GAGCATGAAA
GAGGCGGCGG CTCTGCCTTT GGTATCTATC ACGGCCTGGG AAGCACTGCA AAACAAGCTG
GCTGTAAAAG AGGGGGATAA GGTACTCATT CATGGTGCGA CTGGCGGCGT GGGTCACATC
GCTATTCAGT TAGCTAAATA CTTTGGCGCA AACGTGACTG CGACCTCTAT GGCTAAAAAT
ATAGCAGTTG CAGCGACATT AGGGGCAGAT AACTTAGTCA ACGTGGCAGA GCAAAGCGTA
CAGGAGTATG TGGAGCAATA TACCGATGGT GTAGGCTTCG ATGCCATTTT TGATACGGTG
GCCGGTGAGA ATATTCAACG CAGCTTCGAG GCTGCACGAT TTAACGGCGG CGTTGCAACG
ACCCTGCCTA TTGAAAATGT ATTACAGGTG GCCTTAAAAA GCCTGAGTTT TCACAGCGTG
CTGATGCTTA TTCCTATGGT TGAGGGGATT AACCGCAGCG CTCATGGTGA GATCTTGACT
AAAGTCGCCG AACTGGTCGA TCTTGGCTTG GTTAAACCTC TGCTGGATGA CTCAGATTTC
ACCATCTGGC AGGTTGCCGA CGCCCATGCC AGATTAGAGT CCGGTAAAGC GGTGGGTAAA
ATTGCGTTAA CGGCTTAA
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| Protein sequence | MKAMIIKQLG SSDVFELADK VTPIVKSGHM LVEVKASSVN PLDTMLRSSD TPWSANLPEV
LHGDVAGIVT EVAGDVGHFK VGDEVYGCAG GIAGIDGALA EFMLVDVDLM AHKPKSLSMK
EAAALPLVSI TAWEALQNKL AVKEGDKVLI HGATGGVGHI AIQLAKYFGA NVTATSMAKN
IAVAATLGAD NLVNVAEQSV QEYVEQYTDG VGFDAIFDTV AGENIQRSFE AARFNGGVAT
TLPIENVLQV ALKSLSFHSV LMLIPMVEGI NRSAHGEILT KVAELVDLGL VKPLLDDSDF
TIWQVADAHA RLESGKAVGK IALTA
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