| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1602 |
|---|
| Symbol | |
|---|
| ID | 5611769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | + |
|---|
| Start bp | 1913078 |
|---|
| End bp | 1913434 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640932472 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001473341 |
|---|
| Protein GI | 157374741 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAA AAGAAGAGCT TCATGGACTT AGCGACAAGC TAGAGCAGTT TCGCCGCAAA
TTCGCCGCCG CTGAAAAGCG TGGTGACAAA GGGATCATGT TGCAATTTAC ACAAGAGATC
AACAAGGTCA CTAAGCGTAT TGCCAGTGTT AAGGCGCAGC AGACTCGTGA ACTGAGTAAG
CAAGGTGGCA GTGTTGCTGG ATTGAAGTTT AAACGCGTTC TGACTAAGGC TGAGCAGGCC
GATATGGGTA AGCTTAAAAA GTCAGTCAAA GGCTTAGTGG TTGTTCATCC TATGACGGCA
CTTGGCCGTG AAATGGGGAT CACCCAAGTG ACAGGCTTCG CCCCGAAAGA ATTTTAA
|
|---|
| Protein sequence | MNLKEELHGL SDKLEQFRRK FAAAEKRGDK GIMLQFTQEI NKVTKRIASV KAQQTRELSK
QGGSVAGLKF KRVLTKAEQA DMGKLKKSVK GLVVVHPMTA LGREMGITQV TGFAPKEF
|
|---|
| |