| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1596 |
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| Symbol | |
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| ID | 5611762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1906188 |
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| End bp | 1907186 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932466 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001473335 |
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| Protein GI | 157374735 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2130] Putative NADP-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCTC AACAAATTCT CTTAGATTCT CGTCCCGAAG GGTTGCCAAC AACAGCTAAC
TTCAAACTGG CTTCATCTCC ATTAGCAGGC ATTAACGATG GTGAGTTTCT GGTAAAAAAC
TTATGGATGT CTGTCGACCC TTATATGCGT GGTCGTATGA TAGACAGAAA AAGTTACATC
GCCCCGTTTG CCATAGGAGA AGTCCTTGAA GGTGGTGCCA TCGGTGAAGT GATCGAGTCC
CGTCATCCTG AGTTTCCGGT TGGAAGTAAA GTCAGTAGCA TGTTGGGTTG GCGCAGCCAC
TATGTGACCG ATGGTAGTGA TCATACTCGT CTGCCACAGA CACCACTGAG TGAATCGCAC
TTTCTTGGCG TGCTGGGTAT GCCGGGAATG ACTGCCTGGA CGGGTCTCAA TCGAATCGCC
GAGCTTAAAG AGGGAGAGAC GCTTTTTGTT TCAGCCGCTT CAGGTGCTGT CGGTAGTGTG
GCTTGCCAGT TGGGTAAGTT GATGGGAGCC AAAGTTGTCG CATCTGTGGG CTCAGATGAA
AAAGCAGAGC ACCTATTATC TATTGGTGTC GATGCTGTCA TTAATTATAA AATATCGGAA
AATTTAAGTG CTGAATTACA CGCGGCAGCA CCTGAAGGGA TCGATGTTTA TTTTGAAAAT
GTCGGCGGCG AGCACCTGTC TGCAGCACTC GACAACATGA ATGACCATGG CAGAATTGCC
GTGTGTGGCA TGATATCTCA ATACAATGAT ACAAGGCCGA CACCGGGCCC GAGCAATCTG
GCCATGATCA TCATAAAGAA ACTAAAAATC GAAGGATTTA TCGTATTCGA GCACTGGGCT
CATTACCCTG AGTTTGCCAA GCAGATGGGG CAGTGGTTAG CCAGTGGAGC GGTTAAAGCA
GAGCAAACGG TCTACGAAGG GCTTGAACGG GCACCGGATG CGTTTATCGG TTTATTCGAA
GGTAAGAACC GCGGCAAGAT GGTGGTAAAA CTCGCTTAA
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| Protein sequence | MQAQQILLDS RPEGLPTTAN FKLASSPLAG INDGEFLVKN LWMSVDPYMR GRMIDRKSYI
APFAIGEVLE GGAIGEVIES RHPEFPVGSK VSSMLGWRSH YVTDGSDHTR LPQTPLSESH
FLGVLGMPGM TAWTGLNRIA ELKEGETLFV SAASGAVGSV ACQLGKLMGA KVVASVGSDE
KAEHLLSIGV DAVINYKISE NLSAELHAAA PEGIDVYFEN VGGEHLSAAL DNMNDHGRIA
VCGMISQYND TRPTPGPSNL AMIIIKKLKI EGFIVFEHWA HYPEFAKQMG QWLASGAVKA
EQTVYEGLER APDAFIGLFE GKNRGKMVVK LA
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