| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1587 |
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| Symbol | |
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| ID | 5612128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1893672 |
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| End bp | 1894928 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640932457 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473326 |
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| Protein GI | 157374726 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3174] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACCA GTATCTATCA ACTGTTACTA TTAGGCTCTG CTTTGGCCAT CGGACTATTG
GTGGGGGTGG AGCGCGGCTG GAGTAACCGC AATATTGCAG AAGGTAAACG AGTGGCTGGG
CTTCGCACCT TCGGCCTGAT AGGTCTTCTC GGCGGTATCA CCGGTTTGCT GACATCTCAA
CTTGGGGCCC TCATCCTCGC CGTAGCCTTT GCTTGTGTTA CTGCAATGAC AGTCGCCGCT
TACCTGATCA GCAGCCGCGA GACTTCGGAT ATTGGCATGA CCAGCAATAT GGCCATGGTG
ATAACCTTTC TGCTCGGTGC GCTGGCCGGG CTGGATCAGA TCGTTATCGC AGCGGTTTGC
GGGGTAGTCA CCACCTTGCT GCTGCGCTCG AAACATTTCC TCCACAAGTT GCTGATGCAA
CTGTCACAAG CCGAGCTGAA CGCCGGGCTA AACCTGCTTA TCATCTCCGT GGTGCTGTTA
CCCGTATTGC CTGACCAAGG CTATGGTCCC TGGCAAGCGA TCAATCCCTA TGAAACCTGG
TTAATGGTGG TACTGATCGC ACTGATATCC TTCGTCGGAT ATTTTATGAT CCGTATGTTG
GGGGCTCAGC GAGGCATCTT GATGACAGGT TTTGCCGGAG GCTTGCTTTC ATCGACAGCG
CTGACACTGC AGCTATCACG CCTCTCCCGC GATCACCCCT CCCTGCAACA GCTTTGTTCG
GTAGGCGTAC TTGTGGCCTG CGGTGTGATG TTTCCGCGCA TGATATTGGT CGTGGCGTTA
ATTAAACCGG CACTAGTGGA TGCGCTTTTC ATTCCTCTGG TATTGATGCT CGCAGTTGCC
TTCGGCTGTG CGGCACTGAT ATATCGTCAC AATGGCAATC AGCTGGTACT GGATGATGTG
CAACCAAAAA ACCCGCTGAA ACTGGCATCG GCCATGTTAT TCGGGCTTCT GTTAGTCACG
GTGGCGCTGG TTGGCCGGGC GATTGTGGAA TGGTTAGGGG AATCTGGCGT GTTCTTGATA
GCACTGGTGT CGGGTGTCGC CGATGTCGAT GCCATTAACC TGACGCTTTC CAGAATGGCC
GGAGAAGATA TCTCACCAGA TATGGCAGTG CTTGGCATCG TGTTAGCGAG TATTTCCAAT
ACCCTATTCA AAGGCTGTCT GGCTGTATTT GTCGGCGGCG CCGGGATGAT ACGCTGGGTA
ATGCTGCCTC TGGTTCTGAC CGCTGCGACC GGCCTTCTGA CAATATGGTT GTTGTGA
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| Protein sequence | METSIYQLLL LGSALAIGLL VGVERGWSNR NIAEGKRVAG LRTFGLIGLL GGITGLLTSQ
LGALILAVAF ACVTAMTVAA YLISSRETSD IGMTSNMAMV ITFLLGALAG LDQIVIAAVC
GVVTTLLLRS KHFLHKLLMQ LSQAELNAGL NLLIISVVLL PVLPDQGYGP WQAINPYETW
LMVVLIALIS FVGYFMIRML GAQRGILMTG FAGGLLSSTA LTLQLSRLSR DHPSLQQLCS
VGVLVACGVM FPRMILVVAL IKPALVDALF IPLVLMLAVA FGCAALIYRH NGNQLVLDDV
QPKNPLKLAS AMLFGLLLVT VALVGRAIVE WLGESGVFLI ALVSGVADVD AINLTLSRMA
GEDISPDMAV LGIVLASISN TLFKGCLAVF VGGAGMIRWV MLPLVLTAAT GLLTIWLL
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