| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1581 |
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| Symbol | |
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| ID | 5612468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1886418 |
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| End bp | 1886651 |
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| Gene Length | 234 bp |
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| Protein Length | 77 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932451 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001473320 |
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| Protein GI | 157374720 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2501] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0305147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.476483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACAGCAC AAATTGCGAC TTTGGCATTA TTGCCTGGTG AAGAGTTCAT AGAGCTATAT
AAAATTTTGA AGGTCGAAGC TATGGTTGGC GGCGGCGGAG AAGCAAAATT CGTTATTGGT
GAAGGTATGG TTACCGTTGA CGGTGTCGTC GAGACCCGTA AACGTAAGAA GGTTCGTGCG
GGTGAAGTTG TTTCATTCAA CGATACTTCA GTCAAGATTG TAGCGGCAGA ATAG
|
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| Protein sequence | MTAQIATLAL LPGEEFIELY KILKVEAMVG GGGEAKFVIG EGMVTVDGVV ETRKRKKVRA
GEVVSFNDTS VKIVAAE
|
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