| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1579 |
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| Symbol | |
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| ID | 5612466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1885416 |
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| End bp | 1885694 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932449 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_001473318 |
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| Protein GI | 157374718 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00738577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.154492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACAAG CCACTGCAAG ACATTTACTC GTAAGTACTG AAGTTCAGTG TGAAGAGCTT
AAGCAACAGA TTTTGGCTGG CGCCGATTTT GGTGATGTGG CTAAGGCTAA CTCATCTTGC
CCATCAGGCG CTCAAGGTGG CGATCTGGGT TCTTTCGGAC CTGGAATGAT GGTTAAAGAG
TTTGATGAGG TGGTATTCAG TGCACCGCTT AACGAAGTGC AAGGTCCCGT TAAAACTCAA
TTTGGTTACC ATCTGCTTGA AGTGACAAGC CGCGGTTAA
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| Protein sequence | MVQATARHLL VSTEVQCEEL KQQILAGADF GDVAKANSSC PSGAQGGDLG SFGPGMMVKE
FDEVVFSAPL NEVQGPVKTQ FGYHLLEVTS RG
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