| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1570 |
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| Symbol | |
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| ID | 5612557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1876204 |
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| End bp | 1877160 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640932440 |
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| Product | methyltransferase type 11 |
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| Protein accession | YP_001473309 |
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| Protein GI | 157374709 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000565809 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000234255 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAACC ATTGGAGTGA TTATTGGGAA CAGGGGCACT TGACCTCTTT TGGTGAGAGT
TTTAGCAGTA ACTATACCGG GGTGTTAAAT GAGATATGGG CACCACGATT CGAAGAGCTA
ACAAATGACT TTAAGGTATT AGACATCGCG ACAGGTAATG GTGCTTTACC CTTGTTGGTG
AGCGACTATC TGAAAAACAG AGCTGTTGAG GGTGAGGTGA TAGGTGTCGA TCTGGCGAAA
ATTAAGACAG ATATTAATGC CGTTAACTTG GCTGACAACC TTAAAGTAAA ATTATTATCA
AATATTGACT GTATCGAACT TCCTTTTGAA AATGGACAAT TTGAGCTAGT AATGTCCCAG
TATGGAATTG AGTATGCGGA TCTTAAAAAA GCGATCCCCG AAGCATTGAG AGTACTTAGC
ACTAAGGGAC GACTCGCTCT GGTTATGCAC CATGAAAACT CGCTAATTTT GAACCGAAAC
CGACGAATAT TGTCGCTAAT TAAATCTGAG GAGCTTGAAG AAATTTTCAA TTTACTCAGA
GGGATAGTCG ATAAGATGGG AGAGGTGAAG AGTAAGCAAG ATTTAGATAG AGTCAAGCAA
GACCAAAGCT GTGAGGCCCT CAGAATACAG CTAAATGCAG CGATCGGTGT ACTGGTCGAT
AGGGACGAAT CGGCGCTTAA AGACTGTGAA TTACTGAACT ATGTCGCGAC CCTATTTAAG
ACTGGATTGT TTTGGAATAA AGATAAAAAG CTGAACTATA TTGAATTTGC AATACAACAG
CTAAAAACAC TCGATGTAAG GCTGTCCGAA CTGGCCGATG CTGCACAAAC TGAGCGCTCT
TTAGCGGAGA TTATTTCTCT CATTTCACAA CATAATGCAT CGTTGGACCA CCTTTCATCG
GTCGTGGATG AAAATAAGGA TGTTTTGGGC TGGAATTTAT TGATAACAAA GCAATAA
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| Protein sequence | MNNHWSDYWE QGHLTSFGES FSSNYTGVLN EIWAPRFEEL TNDFKVLDIA TGNGALPLLV
SDYLKNRAVE GEVIGVDLAK IKTDINAVNL ADNLKVKLLS NIDCIELPFE NGQFELVMSQ
YGIEYADLKK AIPEALRVLS TKGRLALVMH HENSLILNRN RRILSLIKSE ELEEIFNLLR
GIVDKMGEVK SKQDLDRVKQ DQSCEALRIQ LNAAIGVLVD RDESALKDCE LLNYVATLFK
TGLFWNKDKK LNYIEFAIQQ LKTLDVRLSE LADAAQTERS LAEIISLISQ HNASLDHLSS
VVDENKDVLG WNLLITKQ
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