| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1565 |
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| Symbol | |
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| ID | 5612862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1865796 |
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| End bp | 1866569 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932435 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473304 |
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| Protein GI | 157374704 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.797209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000308798 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGATTTAC TGTTTGAACC TTCAACATGG GCCATATTAG CCGGTATTGG CCTTATCGCA
GGTTTCATCG ATGCTGTTGC CGGTGGAGGG GGATTATTGT CTATCCCCGC GCTACTTACT
GTGGGGATCC CACCGCACTT AGCCTTAGGA ACGAATAAAT TAGCGGCATG CTTTGGCTCA
TCTATGGCCG CATTTACCTA TTATCGAAAG AACCTCTTTA CCCCAAATCT TTGGTACCAC
ACTTTTATTG CGACCTTTAT CGGTGCAGTT AGTGGCACAT TTATCGTCTA TCTGATTGAC
AAGAGTTGGT TAGAAAAATG GCTGCCTGTC ATTATCATTG TTATCGCTAT TTATACTCTA
TTAAAACCAA ATGCGATGGG TTGTACCAGC TTTACTCCAC TGAGAAAGCC GGCTACTGCA
GTTAAACAAT GGCTCCAAGG GGTAATATTG GGGTTTTATG ATGGTTTTGC CGGTCCTGGT
ACCGGCGCTT TTTGGACAAT CAGCAGTACT ACCTATCATC GTCTCCCTCT TCTGCATAGC
TGTGGCTTGG CCAGGGCGAT GACATTCACC AGTAACCTCA CCTCACTGTT AATCTTTTTT
GCACTGGGAA AAGTCAACCT GGTAATTGGC CTATCCATGG GGCTCTGCAT GATGTTAGGT
TCGTTTATTG GCGCGCGATC TGCGATAAAA TTCGGGGTGC AGTTCATCAG GCCCCTGTTT
GTAACTATCG TACTATTGAC CGCAGCAAAA CTTGCCTGGA GTGCTTGGTT TTGA
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| Protein sequence | MDLLFEPSTW AILAGIGLIA GFIDAVAGGG GLLSIPALLT VGIPPHLALG TNKLAACFGS
SMAAFTYYRK NLFTPNLWYH TFIATFIGAV SGTFIVYLID KSWLEKWLPV IIIVIAIYTL
LKPNAMGCTS FTPLRKPATA VKQWLQGVIL GFYDGFAGPG TGAFWTISST TYHRLPLLHS
CGLARAMTFT SNLTSLLIFF ALGKVNLVIG LSMGLCMMLG SFIGARSAIK FGVQFIRPLF
VTIVLLTAAK LAWSAWF
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