Gene Ssed_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1555 
SymbolpspB 
ID5612200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp1856454 
End bp1856687 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content42% 
IMG OID640932424 
Productphage shock protein B 
Protein accessionYP_001473294 
Protein GI157374694 
COG category 
COG ID 
TIGRFAM ID[TIGR02976] phage shock protein B 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000980293 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCGG ATATTTTAAT GGCCCCAATT ATTATTTTTT TGATAATAGT GGCTCCCATA 
TGGCTGATTC TTCACTATCG CAGTAAGCGT CAAGTGAGCC AGGGACTTAC TGATGAAGAG
TATTCTCAGC TTAATGAACT AATCACCAGA GCCGACAAAA TGGCTCAACG TATTGATACA
TTGGAATCGA TTTTAGACAC TGAGTCGCCA CAATGGAGGA GCCGTGATGA GTGA
 
Protein sequence
MNADILMAPI IIFLIIVAPI WLILHYRSKR QVSQGLTDEE YSQLNELITR ADKMAQRIDT 
LESILDTESP QWRSRDE