Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1555 |
Symbol | pspB |
ID | 5612200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1856454 |
End bp | 1856687 |
Gene Length | 234 bp |
Protein Length | 77 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640932424 |
Product | phage shock protein B |
Protein accession | YP_001473294 |
Protein GI | 157374694 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02976] phage shock protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000980293 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGCGG ATATTTTAAT GGCCCCAATT ATTATTTTTT TGATAATAGT GGCTCCCATA TGGCTGATTC TTCACTATCG CAGTAAGCGT CAAGTGAGCC AGGGACTTAC TGATGAAGAG TATTCTCAGC TTAATGAACT AATCACCAGA GCCGACAAAA TGGCTCAACG TATTGATACA TTGGAATCGA TTTTAGACAC TGAGTCGCCA CAATGGAGGA GCCGTGATGA GTGA
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Protein sequence | MNADILMAPI IIFLIIVAPI WLILHYRSKR QVSQGLTDEE YSQLNELITR ADKMAQRIDT LESILDTESP QWRSRDE
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