| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1533 |
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| Symbol | |
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| ID | 5613499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1830005 |
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| End bp | 1831675 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932399 |
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| Product | glutaminyl-tRNA synthetase |
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| Protein accession | YP_001473272 |
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| Protein GI | 157374672 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.208966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.486812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCATG TGGACAGCGA AGTACGTCCA AGTAACTTCA TTCGTAACAT CATAGATGAA
GATCTTGAAA GCGGTAAACA CACAAGTGTA CATACCCGTT TTCCACCAGA GCCAAACGGC
TACCTTCATA TTGGTCACGC TAAATCTATC TGCCTGAATT TTGGAATAGC GCAAGATTAT
AAAGGCCTAT GTAATTTACG TTTCGATGAT ACCAATCCTG AAAAGGAAGA TATCGATTAT
GTACATTCGA TTCAAGATGA TGTGAAGTGG CTGGGTTTCC AGTGGGATGG TGAGATCCGT
TATTCATCAA ACTACTTCGA CAAGCTACAT CAATATGCCA TTGAGTTGAT CAATAAAGGG
TTAGCGTATG TCTGTTTTCT CAATAGCGAA GAGACCCGTG AATACCGTGG CACACTAAAA
GAGCCTGGTA AGAACAGCCC TTATCGTGAT ACTTCAGTTC AGGAAAACCT TGAGCTGTTT
GAAAAAATGC GTAAAGGTGA ATTCAAAGAG GGTGAGTGTG CACTTAGGGC CAAAATTGAT
ATGGCTTCCT CTTTTATGTG CATGCGCGAT CCTGTTATTT ATCGTATTCG CTTCGCTCAC
CATCACCAGA GTGGTGATAA ATGGTGCATC TATCCGATGT ACGATTTTAC CCATTGTATC
TCTGATGCGA TTGAAAACAT CAGCCATTCA TTGTGTACAT TAGAGTTTCA GGATAATCGC
CGTCTTTATG ATTGGGTACT CGATCAGCTG GATGATTTTA AAGCGCCGAA CAGAACCCGT
CAGTATGAAT TCTCCAGACT GAATTTAGAA TACACATTGA TGTCAAAGCG TAAGCTTAAC
GATCTTGTGG TGCGTGACGT CGTTCATGGT TGGGATGATC CGCGTATGCC AACTATTGCA
GGCCTTCGTC GCCGTGGTTA TACCTCAGCT TCTATTCGTG AGTTTTGTAA GCGAATTGGT
GTGACCAAGC AAGAGAATAT GATCGAAGTC GGCATGCTGG ATGCGTGTAT TCGTGAAGAG
CTTAATGAGC ACGCACCGCG TGCTATGGCA GTCATTAATC CAGTTAAAGT GATTATTGAA
AATTACCCTC AAGATCAGAT TGAAACCATC AATGCTCCGG TTCATCCAAG CAATGAAGAG
ATGGGTAAAC GTGAGTTGGC ATTCGGTCGT GAACTTTTTA TCGACGCCGC TGATTTCCGT
GAGGAAGCGA ATAAAAAGTA CAAGCGTCTG GTACAAGGTA AGGAAGTTCG TCTTCGTAAC
GCCTATGTTA TTAAGGCCGA GCGATGCGAC AAGGATGCTG AGGGTAATAT TACCACCATT
TACTGTACTT ATGATGATGA GACTCTGGGC AAGAACCCAA GTGATGGACG TAAAGTTAAA
GGCGTCATTC ACTGGGTAGA AGCCAGCACA GCAAAGCCTG CTGAATTCCG CCTATATGAT
CGTCTATTTA CCGATGCGAA CCCGGCTGCA GCCGAAACAA TAGATGAAGT GTTGAATCCT
GACTCTTTAG TTGTGACTCA TGGATTGGTC GAAGCGGGCC TTATCACTGC TGAAGCTGAA
AAGGCTTATC AGTTTGAGCG TGAAGGCTAT TTCTGCGCGG ATAATAAAGA TTCTACGCCA
GAGAGCTTGG TCTTTAACCT GACTGTCGCG CTAAGAGATT CATCTCAGTA G
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| Protein sequence | MSHVDSEVRP SNFIRNIIDE DLESGKHTSV HTRFPPEPNG YLHIGHAKSI CLNFGIAQDY
KGLCNLRFDD TNPEKEDIDY VHSIQDDVKW LGFQWDGEIR YSSNYFDKLH QYAIELINKG
LAYVCFLNSE ETREYRGTLK EPGKNSPYRD TSVQENLELF EKMRKGEFKE GECALRAKID
MASSFMCMRD PVIYRIRFAH HHQSGDKWCI YPMYDFTHCI SDAIENISHS LCTLEFQDNR
RLYDWVLDQL DDFKAPNRTR QYEFSRLNLE YTLMSKRKLN DLVVRDVVHG WDDPRMPTIA
GLRRRGYTSA SIREFCKRIG VTKQENMIEV GMLDACIREE LNEHAPRAMA VINPVKVIIE
NYPQDQIETI NAPVHPSNEE MGKRELAFGR ELFIDAADFR EEANKKYKRL VQGKEVRLRN
AYVIKAERCD KDAEGNITTI YCTYDDETLG KNPSDGRKVK GVIHWVEAST AKPAEFRLYD
RLFTDANPAA AETIDEVLNP DSLVVTHGLV EAGLITAEAE KAYQFEREGY FCADNKDSTP
ESLVFNLTVA LRDSSQ
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